Pairwise Alignments

Query, 647 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

Subject, 639 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  255 bits (652), Expect = 4e-72
 Identities = 191/651 (29%), Positives = 321/651 (49%), Gaps = 30/651 (4%)

Query: 1   MSIKQKLTWAFAVIAGLPIVLVATLVVINLRGEARDGF--LDSSSREIRQVSNAMNIFFQ 58
           +S+K+K+   F+V+  + +   A LV    +   +D +  ++S SR      N +    +
Sbjct: 13  LSLKRKMV--FSVVVAIAVT-AAALVAAGYQTFEKDSWRAIESESR------NTLQAHAK 63

Query: 59  GINQNVEYMASQPMVAATGSELNKYMSATPSYELGEQASKILDFMTRLANSHPAYAYLSY 118
           GI     ++  Q  +     E+ +     P  EL     + L           ++    Y
Sbjct: 64  GIGD--WFLGKQLALKGLREEIER----NPQLELVPHLRQTLQ--------SGSFGLSYY 109

Query: 119 GVNDGGYTGWPAGQKFVNYDPRTRPWYQLAMANPGKTMRTGAYYWAADDAVLVSTVRTVA 178
           G   G            +YDPR R WY+ A A  GK + T  Y       ++V+    V 
Sbjct: 110 GNEQGEMFRQDPSLNTADYDPRVRGWYKEAKA-AGKPITTEPYVSVTMQTLVVTLAEPVR 168

Query: 179 NQLGNPGGVVNIDVSLKGLTEIVKQIKLGESGYLMLVESNGNVMVDP-RDATHNFKQLGS 237
            Q G   GV   +++L  L + V  I++   GY +LV   G ++  P +D      +  S
Sbjct: 169 YQ-GQLIGVAASNLALDKLIKDVLAIEVPGKGYAILVNQKGKIVAHPTQDLILKPTEEMS 227

Query: 238 FGDGYAKLAKAGK--GLVEVELNGVHYMANVYPDQQLGWTFIGLIEQSEVMQTTTRLTWL 295
                +KL  A K   L ++ ++G   +          W  + ++++  + Q    +  +
Sbjct: 228 AQLTISKLNIAAKDHSLFQLSMDGRDKVLMAEEVANTDWLLVMVMDKGVLEQPLNDMLMV 287

Query: 296 IGVIAVVLAALFAVVGAAFAKLIVRPINSVTNGLEDIAQGEGDLTRNLEIRGRDETAQLA 355
              I + +  + A++ + F    +  + ++ N L DIA+G+GDLTR L++R +DE   LA
Sbjct: 288 QIGIGLGILLVMALLTSWFVARQLNELGNIANALADIAEGDGDLTRRLDVRSQDEVGLLA 347

Query: 356 NWFNQFLGAIRSLIQHIGTAASKILSTSSSSTRVSSDMAEAAGRQREAVDMVSTAFHEMV 415
           + FN+F+  +  +++++   +  +   +  +   ++  ++    Q++ + MV+TA  EM 
Sbjct: 348 DKFNKFVDRLHQMVKNVREVSVALTQGADHAAASATQASKRIRTQQDEITMVATAVTEMA 407

Query: 416 ATANEVARSCSQAAQSADSGQQQAREGQQQIDAAVHSVDRLSHEIEQSAQSIQQLERDSN 475
           +   E+A +    A++A    Q   +G  Q+  +  S+D+L+ E+  + + I +LE  +N
Sbjct: 408 SATAEIASNAENTAKNATQSVQLGEDGFAQMQQSKQSIDQLAQELTGAVRIISELEVHAN 467

Query: 476 AIQSILGTIRSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAKRTADSTAEIDG 535
            I +IL TIR IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR L++RT  ST EI  
Sbjct: 468 EISTILSTIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHASTEEIQT 527

Query: 536 LLGNLASRTAEVAEQMHASLEVSQQSVSRIGLARDSFGQIRESVDVIRDMNTQIATAAEE 595
            +  L   T      M  S ++ + SV+ +     S   I E++  I DM TQIA+AAEE
Sbjct: 528 KIAGLQKVTTTAVSVMTESHKLVETSVADVNQTGASLQAISEAIQQISDMATQIASAAEE 587

Query: 596 QHQVAEDINRHISQIHGDAQLVAELAQAARQDSESLAGLSNELDTLVRRFR 646
           Q  V  DIN +   +   +  +AE AQ + Q ++SL  ++ EL+  + RF+
Sbjct: 588 QSLVTADINVNTESVREVSDQLAEEAQQSVQQAKSLHAMAQELNKEISRFK 638