Pairwise Alignments

Query, 647 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

Subject, 644 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  265 bits (676), Expect = 6e-75
 Identities = 186/653 (28%), Positives = 318/653 (48%), Gaps = 29/653 (4%)

Query: 1   MSIKQKLTWAFAVIAGLPIVLVATLVVINLRGEARDGFLDSSSREIRQVSNAMNIFFQGI 60
           MSIKQK      V+ G+ + ++A+ +++ +  + +   +        ++ N + +    I
Sbjct: 13  MSIKQK------VVLGVTLAVLASTLIVGVMAQRQAREVLEHRLVDLELPNILKLIKSDI 66

Query: 61  NQNVEYMASQPMVAATGSELNKYMSAT---PSYE--LGEQASKILDFMTRLANSHPAYAY 115
           +  V  + +     A+   + + ++ T   P+ E  L +Q + + D   RL ++  A   
Sbjct: 67  DHEVLQLLASAQQIASNEFVQQAIATTERDPATEALLVKQLNNLRD-QYRLNDASVANRK 125

Query: 116 LSYGVNDGGYTGWPAGQKFVNYDPRTRPWYQLAMANPGKTMRTGAYYWAADDAVLVSTVR 175
            +Y  N  G+            + +   W+       GK      +  A  +      V+
Sbjct: 126 TAYYWNQNGFLR--------ELNQQQDGWF-FGFIGSGKPTMVSMFQEANGE------VK 170

Query: 176 TVAN-QLGNPGGVVNIDVSLKGLTEIVKQIKLGESGYLMLVESNGNVMVDPRDATHNFKQ 234
             AN QL N   +  +  S+  +  ++   K+ ++G++ L  + G V +  +        
Sbjct: 171 MFANYQLVNGNTMSGMSKSMDDMVRLLNSFKIEDTGFVFLTNAQGEVQIHRQKEQVKSSL 230

Query: 235 LGSFGDGY-AKLAKAGKGLVEVELNGVHYMANVYPDQQLGWTFIGLIEQSEVMQTTTRLT 293
              +G G  A L K+G  L+  +  G   M      + + W  +G +   EV      + 
Sbjct: 231 QQIYGSGASALLNKSGFNLISTDYQGEEVMVASIYIESMDWFLVGTVPVHEVFAELDAVA 290

Query: 294 WLIGVIAVVLAALFAVVGAAFAKLIVRPINSVTNGLEDIAQGEGDLTRNLEIRGRDETAQ 353
             + +  + +AA+F  +G   A  I  PIN +     D+ +G+GDL++ +E++G DE AQ
Sbjct: 291 QRMMLTTLAVAAIFIFMGIFLANSIAMPINQIAKRFTDLGRGDGDLSQRIEVKGNDEIAQ 350

Query: 354 LANWFNQFLGAIRSLIQHIGTAASKILSTSSSSTRVSSDMAEAAGRQREAVDMVSTAFHE 413
           L+  FN F+  I   I+ +   + ++   +   +R +    + + +QR+    V TA ++
Sbjct: 351 LSKGFNGFIEKIHQSIKDVAQTSRELQVAAEGVSRKALVTHDNSQQQRDQTIQVVTAINQ 410

Query: 414 MVATANEVARSCSQAAQSADSGQQQAREGQQQIDAAVHSVDRLSHEIEQSAQSIQQLERD 473
           M AT +E+A + + AA++A+     A +G+  ++ A  ++ RL+H+IE + + ++QL   
Sbjct: 411 MGATISEIASNAATAAETANQASGNADQGRNVVNKAKEAISRLAHDIENTGKVVEQLAST 470

Query: 474 SNAIQSILGTIRSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAKRTADSTAEI 533
           +  I SIL  IR I+EQTNLLALNAAIEAARAG+QGRGFAVVADEVR LA RTA ST EI
Sbjct: 471 TQEIGSILDAIRGISEQTNLLALNAAIEAARAGDQGRGFAVVADEVRNLASRTASSTEEI 530

Query: 534 DGLLGNLASRTAEVAEQMHASLEVSQQSVSRIGLARDSFGQIRESVDVIRDMNTQIATAA 593
             ++  L +        M A   V+ Q V+    A      I + +  I D NTQ+ATA 
Sbjct: 531 QKMINQLQNDAKNAVSAMDAGKTVTHQGVAASDEAVQVLMSISDRIHDISDRNTQVATAT 590

Query: 594 EEQHQVAEDINRHISQIHGDAQLVAELAQAARQDSESLAGLSNELDTLVRRFR 646
           EEQ  V   IN++I +I+   ++    A+     S+SL  LS  LD LV  F+
Sbjct: 591 EEQSTVVHTINQNIEEINAINEVTTSTAEELADASKSLRELSGRLDKLVGNFK 643