Pairwise Alignments

Query, 647 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

Subject, 623 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  272 bits (696), Expect = 3e-77
 Identities = 172/504 (34%), Positives = 274/504 (54%), Gaps = 12/504 (2%)

Query: 127 GWPAGQKFVNYDPRTRPWYQLAMANPGKTMRTGAYYWAADDAVLVSTVRTVANQLGNPGG 186
           GW       +YDPR RPWY  A     K + T  Y   +   +++S + T   Q  N  G
Sbjct: 113 GWEPN---ADYDPRKRPWYVDAKRER-KLVVTEPYVDISTKKIIIS-IGTPVYQQSNFVG 167

Query: 187 VVNIDVSLKGLTEIVKQIKLGESGYLMLVESNGNVMVDPRDATHNFKQLGSFGDGYAKLA 246
            +  DV L  L ++V  + L ++GYL +   +G  +  P +A +N ++   F        
Sbjct: 168 AMFYDVELTQLAQLVNSVNLFDAGYLFITTKDGVTIAHP-NAENNGEKFSQFLPN----V 222

Query: 247 KAGKGLVEVELNGVHYMANVYPDQQLGWTFIGLIEQSEVMQTTTRLTWLIGVIAVVLAAL 306
              +G   +EL+G +Y+          W    ++++S        L     +I  V+  L
Sbjct: 223 DLKEGTQRIELDGKYYLVKFAQVPSESWYIGAVVDESIAFAMVDDLRHS-SLIYTVIGVL 281

Query: 307 FAVVGAAFA-KLIVRPINSVTNGLEDIAQGEGDLTRNLEIRGRDETAQLANWFNQFLGAI 365
            +++G +F  K++++P+ +++  +ED+A G+GDLT+ L+     E A LA  FN F   +
Sbjct: 282 LSIIGLSFLIKVLMKPLGALSRAIEDVASGQGDLTKRLDTNTDMEFAILAKDFNVFCETL 341

Query: 366 RSLIQHIGTAASKILSTSSSSTRVSSDMAEAAGRQREAVDMVSTAFHEMVATANEVARSC 425
           +  IQH+    ++I+  +  +   + + A A  +Q + ++ ++TA HEM  TA EVA + 
Sbjct: 342 QKRIQHLKGIGAEIMHGTEQTVLGAHESASAMAQQLQELEQLATAMHEMAVTATEVANNA 401

Query: 426 SQAAQSADSGQQQAREGQQQIDAAVHSVDRLSHEIEQSAQSIQQLERDSNAIQSILGTIR 485
             AA +A    + +++G + +     S+D LS  IEQ+ + ++ LE  +  I++IL  I 
Sbjct: 402 QGAAAAAHEADEASQDGSKVVSDTTRSIDALSARIEQAVEEVKGLEVATGNIETILKVIN 461

Query: 486 SIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAKRTADSTAEIDGLLGNLASRTA 545
            IA+QTNLLALNAAIEAARAGE GRGFAVVADEVR LA+RT  ST EI  ++  L S  +
Sbjct: 462 DIADQTNLLALNAAIEAARAGESGRGFAVVADEVRTLAQRTQQSTTEIRNMIEQLQSGAS 521

Query: 546 EVAEQMHASLEVSQQSVSRIGLARDSFGQIRESVDVIRDMNTQIATAAEEQHQVAEDINR 605
            V+  M+ S   +  +V +  LA +S  +IR ++  I DMN QIA+AAEEQ  VAE+IN 
Sbjct: 522 AVSAAMNESKYTADDAVQKAQLANESLQRIRGAIQRISDMNMQIASAAEEQSLVAEEINT 581

Query: 606 HISQIHGDAQLVAELAQAARQDSE 629
           +  +I   +  VA+ A++A    E
Sbjct: 582 NTVKIKDLSTQVADSAKSASMAME 605