Pairwise Alignments

Query, 647 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

Subject, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  228 bits (581), Expect = 6e-64
 Identities = 149/513 (29%), Positives = 261/513 (50%), Gaps = 14/513 (2%)

Query: 137 YDPRTRPWYQLAMANPGKTMRTGA----YYWAADDAVLVSTVRTVANQLGNPGGVVNIDV 192
           +DPRTR WY  A     K + T +    Y     + ++V+T   + N+  +  GV+  D+
Sbjct: 122 FDPRTRSWYLNA-----KKLNTFSLSEPYVDLITEKLMVTTSAPIYNK-NDLTGVIFFDI 175

Query: 193 SLKGLTEIVKQIKLGESGYLMLVESNGNVMVDPRDATHNFKQLGSFGDGYAKLAKAGKGL 252
            L  + E++K     ++G + +V+++G ++   ++        G F D +       K  
Sbjct: 176 PLDDVQELIKSYNPFDAGTIFIVDNSGKIIFGNKNDISGKNLFGDF-DSFPLSVSESK-- 232

Query: 253 VEVELNGVHYMANVYPDQQLGWTFIGLIEQSEVMQTTTRLTWLIGVIAVVLAALFAVVGA 312
              + NGV+Y   +      GW  + +I+  +       L       AV+LA++F  +  
Sbjct: 233 -TKDKNGVNYDVLIKMSDFGGWNLVSIIDHDKARSDIITLRNNSIFTAVILASVFFAILL 291

Query: 313 AFAKLIVRPINSVTNGLEDIAQGEGDLTRNLEIRGRDETAQLANWFNQFLGAIRSLIQHI 372
              +L+++P++ +T+ + +I+ G  DLT  +      E +++ N FN F+G ++S++  +
Sbjct: 292 FTMRLMLKPLHQLTDAMVNISSGSADLTVRIPNSTDQEFSKIINSFNIFVGNLQSIVSEV 351

Query: 373 GTAASKILSTSSSSTRVSSDMAEAAGRQREAVDMVSTAFHEMVATANEVARSCSQAAQSA 432
              + KI   ++ +  +      +   Q   +DM++++ +EMVAT+N++A+  S+A++  
Sbjct: 352 KMNSEKINCITTETQELVEVCNNSVADQYRELDMLASSMNEMVATSNQIAQITSEASEIT 411

Query: 433 DSGQQQAREGQQQIDAAVHSVDRLSHEIEQSAQSIQQLERDSNAIQSILGTIRSIAEQTN 492
                Q  EG   + +   SV  L  +++++   IQ L R +  I  IL  I  IA+QTN
Sbjct: 412 SKINGQVNEGVGAVSSVTESVGNLVEKLDKTKSVIQDLNRQTQNIDVILKAINDIADQTN 471

Query: 493 LLALNAAIEAARAGEQGRGFAVVADEVRALAKRTADSTAEIDGLLGNLASRTAEVAEQMH 552
           LLALNAAIEAARAGE GRGFAVVADEVR+LA +T +ST  I  ++  L   +      M 
Sbjct: 472 LLALNAAIEAARAGENGRGFAVVADEVRSLAIKTQESTKNIGSIIHILQENSLLSVHVMD 531

Query: 553 ASLEVSQQSVSRIGLARDSFGQIRESVDVIRDMNTQIATAAEEQHQVAEDINRHISQIHG 612
            S  ++ ++++    ++     I +SV  I D+  Q+ATAA EQ  V+E+IN +   I  
Sbjct: 532 ESFNIASETMTISADSKQCLDNISQSVIQIVDITNQVATAAYEQSHVSEEINSNSISIKD 591

Query: 613 DAQLVAELAQAARQDSESLAGLSNELDTLVRRF 645
            A  ++ L     Q + S   L    D L+ +F
Sbjct: 592 KADTLSSLGNKISQQAYSQKALIGHQDDLISKF 624