Pairwise Alignments

Query, 647 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

Subject, 556 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  225 bits (574), Expect = 4e-63
 Identities = 146/476 (30%), Positives = 245/476 (51%), Gaps = 38/476 (7%)

Query: 186 GVVNIDVSLKGLTEIVKQIKLGESGYLMLVESNGNVMVDPRDATHNFKQLGSFGDGYAKL 245
           G +  + +     + + Q++ G + Y  + ++   +++ P     N K L SF D   K 
Sbjct: 80  GTLTTEQAQNTAKQAIAQLRYGANDYFWINDAQPAMVMHPMKPDLNGKDLRSFKDPNGKA 139

Query: 246 A---------KAGKGLVEVE---------LNGVHYMANVYPDQQLGWT-----FIGLIEQ 282
                     +  +G+VE +         ++ V Y+    P    GW      ++  +  
Sbjct: 140 LFVEMVNVTQRNQQGVVEYQWPKPGAEQPVDKVSYVKLFKP---WGWIIGTGIYVDDVNA 196

Query: 283 SEVMQTTTRLTWLIGVIAVVLAALFAVVGAAFAKLIVRPINSVTNGLEDIAQGEGDLTRN 342
             + + ++ L W++G + V++     V+ +   + I +P       L++IAQGEGDLTR 
Sbjct: 197 LVMQRLSSILVWVVGTLLVLI-----VLASLIGRSITQPCEETLATLKNIAQGEGDLTRQ 251

Query: 343 LEIRGRDETAQLANWFNQFLGAIRSLIQHIGTAASKILSTSSSSTRVSSDMAEAAGRQRE 402
           L + G+DE AQ+A  FN F   IR +IQ I      +  ++   T+V+   +  A  Q +
Sbjct: 252 LTVTGKDELAQIAQAFNLFTNKIRHIIQEITPITESVTGSADELTQVAQSASSKAYDQHQ 311

Query: 403 AVDMVSTAFHEMVATANEVARSCSQAAQSADSGQQQAREGQQQIDAAVHSVDRLSHEIEQ 462
           AVD V++A +++ A+  EVA+S  QA Q+A S  Q A +G++ I      +  L  ++ +
Sbjct: 312 AVDTVASAMNQLHASNQEVAQSAHQAEQAAHSANQAASQGREMITLTSTQMQSLRDQLTR 371

Query: 463 SAQSIQQLERDSNAIQSILGTIRSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRAL 522
           + Q  Q L  ++ ++ ++L  IR +AEQTNLLALNAAIEAARAGEQGRGFAVVADEVR L
Sbjct: 372 TEQETQVLASETQSVSAVLEVIRGVAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTL 431

Query: 523 AKRTADSTAEIDGLLGNLASRTAEVAEQMHASLEVSQQSVSRIGLARDSFGQIRESVDVI 582
           A RT  ST EI+ ++  L  +   V++ M  + + S+ +  +   A+    +I   +  I
Sbjct: 432 ATRTQASTNEIEQIIAQLQKKAQSVSQSMTQTQQQSRVTQQQAEQAQQMLNEIEAQIKTI 491

Query: 583 RDMNTQIATAAEEQHQVAEDINRHISQIHGDAQLVAELAQAARQDSESLAGLSNEL 638
              N  IA A+ +Q +  ++I R+++QI       AE +  A   +  +A  S +L
Sbjct: 492 LSFNQHIAGASAQQSEATDEITRNLTQI-------AEHSTQASAQANQVAAASEQL 540