Pairwise Alignments

Query, 647 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

Subject, 695 a.a., methyl-accepting chemotaxis protein, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  254 bits (649), Expect = 9e-72
 Identities = 194/704 (27%), Positives = 319/704 (45%), Gaps = 70/704 (9%)

Query: 1   MSIKQKLTWAFAVIAGLPIVLVATLVVINLRGEARDGFLDSSSREIRQVSNAMNIFFQGI 60
           M+I+ KL  AF     + I  + T+V + +   +   F +SS  ++ + ++ +  F    
Sbjct: 1   MTIRTKLVLAFLASIVVAIGSITTVVSLQVSKNSVAAFEESSLGQLDRTNDFIAAFLNEA 60

Query: 61  NQNVEYMASQPMVAATGSELNKYMSAT--PSY---ELGEQASKILDFMTRLANSHPAYAY 115
             N  ++A    V     ++  Y++ T  PS    ++     K+ D    +   +PAY  
Sbjct: 61  RYNAMFLAKLDEVVQAPGKITSYVNTTSAPSIRRADMQPNEQKLFDIFMHMTKGNPAYDG 120

Query: 116 LSYGVNDGGYTGWPAGQKFVNYDPRTRPWYQLAMANPGKTMRTGAYYWAADDAVLVSTVR 175
           +  G  +GG+  +P       YDPR RPWY+ A+ + G+       Y +     + S V 
Sbjct: 121 VFLGTAEGGFNMFPEDSLPAGYDPRKRPWYKEALGS-GEDSIISKAYMSTTRVPVSSVVA 179

Query: 176 TVANQLGNPGGVVNIDVSLKGLTEIVKQIKLGESGYLMLVESNGNVMVDPRDATHNFKQL 235
            V +      G + ID++L  LT +   + +G++GY+MLVE  G ++ DP+     FK +
Sbjct: 180 KVFDAQRRVVGAIGIDINLSTLTRVTSALHIGQTGYVMLVEDTGIIISDPKHEQFAFKNI 239

Query: 236 GSFG-DGYAKLAKAGKGLVEVELNGVHYMANVYPDQQLGWTFIGLIEQSEVMQTTTRLTW 294
              G   + ++    +G+ E  L+G   +  V     LGW  + +I+  EV      L +
Sbjct: 240 TETGTPAFTRIMGMKRGMFEDSLDGKDRIFTVVTG-YLGWKLVSVIDADEVYGKARSLVF 298

Query: 295 LIGVIAVVLAALFAVVGAAFAKLIVRPINSVTNGLEDIAQG-----------EGDLTRNL 343
            I  I   +A +   V    A+ +  PI  +     ++A+G            G+L   L
Sbjct: 299 TIVSIGFGIALVLLAVAWFIARSVAEPIRMLVEASGEVARGNFNALPSERHFSGEL---L 355

Query: 344 EIRG--RDETAQLANWFN---------------------------------------QFL 362
            +RG   D   QL N  +                                       Q  
Sbjct: 356 TLRGSLNDMVTQLGNLVSTAETKTQEAEEQARKAGEALTQAEEARRAGEVARREGIMQTA 415

Query: 363 GAIRSLIQHIGTAASKILSTSSSSTRVSSDMAEAAGRQREAVDMVSTAFHEMVATANEVA 422
           G + S++  I +A+ ++ S    +TR  SD+      QR      +TA  EM A+  EVA
Sbjct: 416 GRLESIVDQITSASQELASQIGEATR-GSDI------QRARTTEAATAMEEMNASVLEVA 468

Query: 423 RSCSQAAQSADSGQQQAREGQQQIDAAVHSVDRLSHEIEQSAQSIQQLERDSNAIQSILG 482
            + S+AA+SA+  +++A  G   +   V S+  ++    +   S+  L + +  I  I+ 
Sbjct: 469 SNASRAAESAEHARKEAEGGGGIVRDVVSSIGEVNRFAAEMGGSLDDLGKQAEGIGHIMT 528

Query: 483 TIRSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAKRTADSTAEIDGLLGNLAS 542
            I  IA+QTNLLALNAAIEAARAGE GRGFAVVADEVR LA++T  +T E+   +G +  
Sbjct: 529 VITDIADQTNLLALNAAIEAARAGEAGRGFAVVADEVRKLAEKTMTATKEVGDAIGAIQR 588

Query: 543 RTAEVAEQMHASLEVSQQSVSRIGLARDSFGQIRESVDVIRDMNTQIATAAEEQHQVAED 602
            T    + M  +  V  QS      A D+ G+I   V+   D    IATA+EEQ   +E+
Sbjct: 589 GTRNNIDGMSRASGVISQSTDLASRAGDALGRIVNIVESTADQVRSIATASEEQSAASEE 648

Query: 603 INRHISQIHGDAQLVAELAQAARQDSESLAGLSNELDTLVRRFR 646
           INR   +++  A  +AE    +      LA L+ +L  ++R+ +
Sbjct: 649 INRSTEEVNRIASEMAEAMSQSAVAVNELARLAADLQDIIRQLK 692