Pairwise Alignments

Query, 259 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 264 a.a., Transcriptional regulator, AraC family from Pseudomonas fluorescens FW300-N2E2

 Score =  170 bits (431), Expect = 2e-47
 Identities = 94/257 (36%), Positives = 141/257 (54%), Gaps = 1/257 (0%)

Query: 2   PIIGHPRAIPALEHLPRPLYARAESLGAGSWTTRHQHDWVQFSYAISGVLGVYTRDGSYF 61
           P   H +  P    LP P++ R+  + A +   RH+H W +F Y+ SGV+ +      Y 
Sbjct: 3   PPAQHLKIPPFEAVLPSPIFFRSACMPAHATYPRHRHAWGEFVYSYSGVMEIEIAQHHYL 62

Query: 62  APPQWGVWIPADAEHEVVTSMQAEMRSLYVRRDACPWAPEQCRVLEVTPLARELIKQFCL 121
           APPQ+G+W+P D EH      +A   SLY+  + C   P     L ++PL R L+++   
Sbjct: 63  APPQYGIWLPPDMEHVGFNRHEACHCSLYLAAELCDALPAVPCALTLSPLIRALLEELRS 122

Query: 122 FPADYPEDDSAEARLVAVLLDQLRSLPEVGFSLPLPRHPGLLALCNGLIAAPDQPQTLQQ 181
            P   P+    + RL+ VL+D+L   P VG  LP    P L  +   L A P  P++L Q
Sbjct: 123 DPPSQPQTPEQQ-RLLQVLVDKLAQAPHVGSYLPSSDDPLLGPVLRALEANPGDPRSLPQ 181

Query: 182 WARELGCSEKTLMRLFQRETGLSFRNWRQRMRLLSSLALLEAGENVTEAALGCGYDSTSA 241
            AR    +E+TLMR  QR+ G+S   WRQR++++ +LALLE G++V    L  GY S SA
Sbjct: 182 LARAANTTERTLMRRAQRDLGMSLVEWRQRLKVIEALALLERGQSVETIGLDLGYSSASA 241

Query: 242 YIAAFKQLFGATPGELK 258
           +I+ F+++ G TP E +
Sbjct: 242 FISMFRKMMGTTPDEYR 258