Pairwise Alignments

Query, 259 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 265 a.a., helix-turn-helix transcriptional regulator from Ralstonia sp. UNC404CL21Col

 Score =  149 bits (377), Expect = 4e-41
 Identities = 89/247 (36%), Positives = 128/247 (51%), Gaps = 6/247 (2%)

Query: 8   RAIPALEHLPRPLYARAESLGAGSWTTRHQHDWVQFSYAISGVLGVYTRDGSYFAPPQWG 67
           R  P+  H P  LY R   + A +   RH H W Q +Y+ + VL V   D ++  PP   
Sbjct: 13  RTPPSAAH-PVRLYTR--QMEANTRFPRHTHPWAQVAYSHNSVLRVQAGDTAWVVPPSRA 69

Query: 68  VWIPADAEHEVVTSMQAEMRSLYVRRDACPWAPEQCRVLEVTPLARELIKQFCLFPADYP 127
           +WIP   EHEV     A +R+LY           QCRV+EV+PL RELI          P
Sbjct: 70  IWIPPGIEHEVWVVEAAFLRTLYADPSVVTGTLAQCRVMEVSPLLRELI---AAMDVRQP 126

Query: 128 EDDSAEARLVAVLLDQLRSLPEVGFSLPLPRHPGLLALCNGLIAAPDQPQTLQQWARELG 187
              + E  L  ++LD+LR    +   LP+P    L ALC  ++A P    T    AR++G
Sbjct: 127 LPAAREQALATLILDELRRSAPLPLDLPMPADKRLRALCERVMADPGTSLTFDALARDVG 186

Query: 188 CSEKTLMRLFQRETGLSFRNWRQRMRLLSSLALLEAGENVTEAALGCGYDSTSAYIAAFK 247
            S +TL R F+ E G+SF  WRQ+  L S++ ++  G  ++  A   GY+S SA+ A F+
Sbjct: 187 ASARTLARRFRDELGVSFSQWRQQAVLASAIPMMSQGMPLSRVAQELGYNSQSAFSAMFR 246

Query: 248 QLFGATP 254
           + FG++P
Sbjct: 247 RAFGSSP 253