Pairwise Alignments

Query, 249 a.a., putative Methyltransferase from Pseudomonas putida KT2440

Subject, 260 a.a., tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM from Vibrio cholerae E7946 ATCC 55056

 Score =  144 bits (362), Expect = 2e-39
 Identities = 89/250 (35%), Positives = 135/250 (54%), Gaps = 9/250 (3%)

Query: 3   DRHFDELATRFAEKIYGGAKGAIRLAVLQADLAEALPDR-----PLRILDIGAGLGHMAL 57
           DR+FD++A +FA+ IYG  KG IR  ++  DL + L        PL +LD G GL  ++ 
Sbjct: 4   DRNFDDIAHKFAKNIYGSDKGEIRQVIVWEDLEQLLSQLDTQKVPLHVLDAGGGLAQVSQ 63

Query: 58  WLAERGHQLTLAEPAAPMLDGARARFAEAG--QTATFIQAPWQDLLGQLTERYDLVLCHA 115
            +A  GH++TL + ++ ML  A    A  G  +   F+ +P Q +   L    DLVL HA
Sbjct: 64  KIARLGHRVTLCDLSSEMLQLAEQDIANNGLLEQYRFVHSPVQTIQAHLDAPVDLVLFHA 123

Query: 116 VLEWLAEPESILPVLHQLTAPGGWLSLAFYNRDALVYRNLLKGHFRKLRSNRLEGEKQSL 175
           V+EWLAEP+  L  L     PGG +S+ FYN   LVY+N + G+   +  +    ++  L
Sbjct: 124 VMEWLAEPKPALQNLLAQVRPGGMVSVMFYNYHGLVYKNAVCGNIPHVLEDMPHRKRFKL 183

Query: 176 TPQKPLDPRELKAQL-EPMWLVESESGVRVFHDYMPK-EFQGKAELLDLLEMELAHRRHP 233
            PQK L P E+   + E  + +  +SG+R F DY+   +  G+ +  DL+ +E    R  
Sbjct: 184 QPQKGLLPEEVYQWIEESSFEICGKSGIRCFSDYIGNMKNMGEYQYEDLVALERKFCRQE 243

Query: 234 TFAGLGRYLH 243
            +  LGRY+H
Sbjct: 244 PYLSLGRYIH 253