Pairwise Alignments

Query, 784 a.a., peptidoglycan glycosyltransferase from Pseudomonas putida KT2440

Subject, 750 a.a., Penicillin-binding protein 1A (NCBI) from Rhodospirillum rubrum S1H

 Score =  176 bits (447), Expect = 3e-48
 Identities = 192/627 (30%), Positives = 280/627 (44%), Gaps = 73/627 (11%)

Query: 2   PSLARPRCRAGRLLRATLISLLVLGGLFWLADRVWPLPLPGDDLARVVLAEDGTPLWRFA 61
           P+L  P    GR+  A    +L LG L  LA  ++ +PL           E     +  A
Sbjct: 30  PALRHP----GRIALAIAGVVLALGVLV-LAINLYTMPLSPS------FQEPERSGFLIA 78

Query: 62  DADGVW--------RYPVSPEEVSPLYLQALLTYEDRWFYNHPGVNPLALARAAWLNLRG 113
           DA+G            PV+  E+    + A++ +EDR F +H GV+P  +ARA W+NLR 
Sbjct: 79  DAEGTVVATRGVTAGRPVALAEMPASLVNAVIAFEDRRFRDHWGVDPRGIARAIWVNLRS 138

Query: 114 GRVVSGGSTLSMQVAR--LLDPHDRTLVGKLRQLWRTLQLEWHLSKRDILQIYLNRAPFG 171
           G    G STL+ Q+ +  LL P ++T   K+++    L +E  L+K +IL+ YLN    G
Sbjct: 139 GGRTQGASTLTQQLVKNTLLTP-EKTFTRKIQEAMLALWIERKLTKDEILERYLNSLYLG 197

Query: 172 GTLQGVAAASWAYLGKSPLHLTPAEAALLAVLPQAPSRLRPDRHPERAQRARDKVLQRLA 231
               GV AA+  Y  K    L+ AE+A++A L QAP+R  P    + A++  + VL  + 
Sbjct: 198 AGSYGVDAAARRYFNKPVTDLSLAESAMIAGLIQAPARTGPTTALDVARQRAELVLDVMR 257

Query: 232 EYQVWPAQQIREAAEEPLVLA--PRQEPA-------LAPLLARRLNSADSPPLIRTTLDA 282
           +  +  A +   A   P  LA  P + PA       +A    + L       L+ +TLD 
Sbjct: 258 DQGLIGADEATWAKAHPASLAVPPVELPAYGAVSDWIADEARKALGPLSGDFLVVSTLDR 317

Query: 283 AL----QRRLEDLLLGWRARLPERTSAAILVVEAQSMAVRAYLGSIDLSDERRFGHVDMV 338
            L    Q+ +++ +    A L  R + A LV  A    V A +G  D   E +F     V
Sbjct: 318 RLQVLAQQTIQEGMAAEGAGL--RATQAALVAMAPDGRVLAMVGGRDY-QESQFNRA--V 372

Query: 339 RSLRSPGSTLKPFLYGMALDDGLIHSESLLQDVPRRYGDYRPGNFSMGFS-GPVSASSAL 397
           ++ R PGS  K F+Y  AL +     +  + D P     + P N+  G   G V    A 
Sbjct: 373 QARRQPGSIFKLFVYLTALSNNW-RPDDPIDDTPLTIDGWSPENYGGGAGHGSVPLRVAF 431

Query: 398 ALSLNLPAVQLLEAYGPKRFAAQLRMAGMPLILPPLAEPNLSLILGGAGSRLEDLVGGYA 457
           A S NL AV+L EA G +   A  R  G+   L PL     SL LG   + L DL   +A
Sbjct: 432 AHSYNLAAVRLQEAVGREAVIATARSMGLKDDLQPLP----SLALGTFPATLLDLTSAFA 487

Query: 458 ALARGGNSAQVRLQPQAPLVEHRLLSPGAAWIIRRI-LSGQARPDRDPHAELVQRPLLA- 515
           A+A    + Q       P V   L +PG+  I   +  SG+A   R    +L+   +   
Sbjct: 488 AVAADRATVQ-------PRVIEVLRTPGSGEIRPPVRQSGRAPWPRASALDLLNAVVTQG 540

Query: 516 ------------WKTGTSYGFRDAWSIGVGPRYLIGVWIGRPDGTPVPGQFGLASAAPLM 563
                        KTGT+   RDAW IG     +IGVW+G  D TP+ G     S   L 
Sbjct: 541 TGRAAALGVPTYGKTGTTQDNRDAWFIGFAGNLVIGVWVGNDDETPMTG----ISGGGLP 596

Query: 564 LQVHDLLSNRDSQRGI--SVPVAPVPA 588
            ++    + R    G+  S P AP+ A
Sbjct: 597 AKLWQSFAARALAGGVAGSAPAAPIAA 623



 Score = 26.2 bits (56), Expect = 0.007
 Identities = 13/41 (31%), Positives = 21/41 (51%)

Query: 372 PRRYGDYRPGNFSMGFSGPVSASSALALSLNLPAVQLLEAY 412
           PRR     PG  ++  +G V A   L L++NL  + L  ++
Sbjct: 27  PRRPALRHPGRIALAIAGVVLALGVLVLAINLYTMPLSPSF 67