Pairwise Alignments

Query, 784 a.a., peptidoglycan glycosyltransferase from Pseudomonas putida KT2440

Subject, 807 a.a., penicillin-binding protein, 1A family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  119 bits (298), Expect = 7e-31
 Identities = 75/207 (36%), Positives = 114/207 (55%), Gaps = 4/207 (1%)

Query: 45  LARVVLAEDGTPLWRFADADGVWRYPVSPEEVSPLYLQALLTYEDRWFYNHPGVNPLALA 104
           L   V A DG+ +  F       R+    +++SP   QA L  ED  FY H G++P+A+ 
Sbjct: 47  LVTTVYARDGSVMGYFYREK---RFLAPLDKMSPRVPQAFLAAEDDGFYRHEGIDPIAIF 103

Query: 105 RAAWLNLRGGRVVSGGSTLSMQVA-RLLDPHDRTLVGKLRQLWRTLQLEWHLSKRDILQI 163
           RA   N++ G +  GGST++ Q+  RLL   +++   K+++     +LE +LSK +IL I
Sbjct: 104 RAFLKNMQAGSIKQGGSTITQQIVKRLLLTSEKSYERKIKEAILAYRLEKYLSKDEILTI 163

Query: 164 YLNRAPFGGTLQGVAAASWAYLGKSPLHLTPAEAALLAVLPQAPSRLRPDRHPERAQRAR 223
           YLN+   GG   GV AA+  Y GK    L+ AEAA++  LPQAPS+  P R P+  ++ +
Sbjct: 164 YLNQIYLGGGAYGVEAAARTYFGKHVNELSLAEAAVIGGLPQAPSKYNPFRDPDATRQRQ 223

Query: 224 DKVLQRLAEYQVWPAQQIREAAEEPLV 250
             VL R+ +       +  EA  +PLV
Sbjct: 224 MYVLHRMLDLGWINRAEYDEAVAQPLV 250



 Score = 82.0 bits (201), Expect = 1e-19
 Identities = 80/279 (28%), Positives = 124/279 (44%), Gaps = 29/279 (10%)

Query: 306 AILVVEAQSMAVRAYLGSIDLSDERRFGHVDMVRSLRSPGSTLKPFLYGMALDDGLIHSE 365
           A++ +E  +  V A +G    SD + F     +++ R PGS+ KP +Y  A+D G   + 
Sbjct: 462 AVVTIEPDTGDVLALVGGYSFSDSQ-FNRA--IQARRQPGSSFKPIVYSAAMDHGFT-AG 517

Query: 366 SLLQDVP----RRYGD--YRPGNFSMGFSGPVSASSALALSLNLPAVQLLEAYGPKRFAA 419
           S++ D P      Y D  +RP NF   F GP    +ALA S NL  +++ +  G      
Sbjct: 518 SVVLDAPFVYLNEYTDKIWRPENFEGVFYGPTLLRTALAKSRNLCTIRVAQKIGIPAVIE 577

Query: 420 QLRMAGMPLILPPLAEPNLSLILGGAGSRLEDLVGGYAALARGGNSAQVR---------- 469
           +    G+    P      LS+ LG       ++   Y A A  G  A+ R          
Sbjct: 578 RATALGLEGPFPN----ELSVSLGAVAVSPINMAEAYTAFAAEGRVAKRRFIHSIGDAWG 633

Query: 470 --LQPQAPLVEHRLLSPGAAWIIRRILSGQARPDRDPHAELVQRPLLAWKTGTSYGFRDA 527
             L    P V   +LSP  A+I+  ++    +      A+++ +PL A KTGT+   RDA
Sbjct: 634 ETLFESKPDVRE-VLSPQNAFIMATLMKEVVQDGTATKAKVLGKPL-AGKTGTTNDERDA 691

Query: 528 WSIGVGPRYLIGVWIGRPDGTPVPGQFGLASAAPLMLQV 566
           W IG  P  +  V++G     P+ G+F     A L + V
Sbjct: 692 WFIGYTPHLVTAVYVGFDQVAPM-GKFETGGRAALPIFV 729