Pairwise Alignments

Query, 445 a.a., MATE efflux family protein from Pseudomonas putida KT2440

Subject, 455 a.a., transmembrane protein from Sinorhizobium meliloti 1021

 Score =  240 bits (613), Expect = 6e-68
 Identities = 158/425 (37%), Positives = 222/425 (52%), Gaps = 14/425 (3%)

Query: 13  THRKVWALAAPMILSNISVPLVALVDSTVIGHLPHAHQLGAVAVGATLFTFMVGLMGFLR 72
           T+R ++++A PM L  ++ PL+ LVD+ V+G L  A  L  +AVGA +F  +     FLR
Sbjct: 22  TNRLIFSIALPMTLGFLTTPLLGLVDTAVVGRLGQAELLAGLAVGAVMFDLIFTTFNFLR 81

Query: 73  MGSTGFAAQAAGRGDGAALRQVLVQGLLLAVGFALLIGLLALPFSQLALHAMQPSAALQQ 132
             +TG  AQA GRGD    + V  + L++A+     I L++       L  M P   + +
Sbjct: 82  AATTGLVAQAYGRGDRREQQAVFWRSLMIALVTGAAIVLISPILLSAGLWLMGPGPEVAE 141

Query: 133 STEDFFHTRLLGLPAALASYALVGWFLGTQNARAPLAILLTTNLLNIALNLWFVLGLDWG 192
            T  +F  R+L  PAALA+YA++G+ LG       L +    N  NI L++   L L WG
Sbjct: 142 VTRTYFLYRILSGPAALANYAILGFVLGRGEGTLGLMLQTLINGTNIVLSILLGLFLGWG 201

Query: 193 VLGSARASVIAEWSAALLGLALT--RPALRAYPGQIVWAALKRWQAWRPLLAVNRDIFLR 250
           V G A  +V  E   AL G A+   R   +  PG   WA +      + L  +NRDI +R
Sbjct: 202 VAGVAIGTVAGEVIGALAGFAIVYGRFDSKDAPG---WAMIFARDRLKKLFGLNRDIMIR 258

Query: 251 SLALQLVFLLITVQGARLGEATVAANALLLNGLLLTAYALDGLAHAVEALCGHAIGARDR 310
           S AL   F L+T  G   G  T+AANA+L+   L+  Y LDGLA A E L G +IGA  R
Sbjct: 259 SFALLAAFTLVTRIGTSFGPVTLAANAVLMTIFLVAGYYLDGLATAAEQLTGRSIGAGYR 318

Query: 311 DTLRRSLVVACGWSLITSLGFAGLFLLG----GHLFIDLQTDIESVRAAAYPYLPYLALL 366
               R L +   W    SLG A L  L     G+  +++ T    VRA AY Y+P+ A+ 
Sbjct: 319 PAFDRVLRMTALW----SLGLAALTTLALLAFGNAVVNMLTTAPDVRALAYQYMPWAAVT 374

Query: 367 PLIAVWSYLLDGLFIGATRAREMRNAMLVSVL-IALPVAVAMSGLGNHGLWMAFLGFMGL 425
            L    ++L+DG+FIGA  +R+MRN ML + +     +AV +   GNHGLW     F+ L
Sbjct: 375 ALTGALAFLMDGVFIGAGWSRDMRNMMLAAFIGYVAALAVLVPAFGNHGLWAGLNLFLLL 434

Query: 426 RAVTL 430
           R   L
Sbjct: 435 RGAFL 439



 Score = 27.3 bits (59), Expect = 0.001
 Identities = 36/119 (30%), Positives = 54/119 (45%), Gaps = 21/119 (17%)

Query: 239 PLLAVNRDIFLRSLALQLVFLLITVQG-------ARLGEATVAAN---ALLLNGLLLTAY 288
           P L  NR IF  +L + L FL   + G        RLG+A + A      ++  L+ T +
Sbjct: 18  PFLVTNRLIFSIALPMTLGFLTTPLLGLVDTAVVGRLGQAELLAGLAVGAVMFDLIFTTF 77

Query: 289 ALDGLAHAVEALCGHAIGARDRDTLR----RSLVVA--CGWSLI---TSLGFAGLFLLG 338
             + L  A   L   A G  DR   +    RSL++A   G +++     L  AGL+L+G
Sbjct: 78  --NFLRAATTGLVAQAYGRGDRREQQAVFWRSLMIALVTGAAIVLISPILLSAGLWLMG 134