Pairwise Alignments

Query, 451 a.a., Response regulator from Pseudomonas putida KT2440

Subject, 544 a.a., response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  237 bits (605), Expect = 6e-67
 Identities = 137/413 (33%), Positives = 216/413 (52%), Gaps = 8/413 (1%)

Query: 38  VYILLQDHERAQRLAQQLEFFGLVVQALPSAAAFLASISEYPPSAIIMDV---DFTGAGL 94
           + I+  D+     + +QL  FG  VQ   +   F+      P   I++D+   D+T   L
Sbjct: 132 IAIIEDDNNVGAMITKQLHEFGFNVQHFLNFTDFIKVQYASPFDLILLDLILPDYTEDAL 191

Query: 95  GLLLAAQVQQGLARSIPLLFFSHHEADTPTRLAAVRAGGQDFLTGSLEASSLLEKVELLT 154
               A + ++   R    +F     +D   RL A+RA   ++     E + L+ K+    
Sbjct: 192 -FEAACEFEKNNTR----VFVLSSRSDFDMRLLAIRANVSEYFVKPAETTLLVRKIHQWL 246

Query: 155 NTAPHDPLRVLIIDDSRTQAMYTERVLAGAGMLTRSLTDPIRTMAELADFQPDLIILDLY 214
             +   PL+VL++DD ++   Y   +L   G++ R +T P + +  L  F+PDL I DLY
Sbjct: 247 KMSDKPPLKVLLVDDQQSMVDYFSSLLRSHGLMVRGMTKPEQVIPTLEQFEPDLFIFDLY 306

Query: 215 MPACTGPELAKVIRHSDRYVSVPIIYLSAEDDLDKQLDAMSEGGDDFLTKPFRSRHLITT 274
           MP   G ELA++IR  D+Y S PI+ LS++D +  ++  +  G DD ++K       +T 
Sbjct: 307 MPGVNGLELARMIRQLDKYTSSPILVLSSDDTMQNKVSIIQAGSDDLISKQTAPSLFVTQ 366

Query: 275 VRNRAARARHLKARMVRDSLTGLYNHTHILQLLEDCSFRARREQQPLSFAMLDIDHFKKI 334
           V +RA R   +++   RDSLTGL NHT IL     C   A+R    +  AMLD+DHFK++
Sbjct: 367 VISRAQRGHDIRSSASRDSLTGLLNHTQILVAARHCINLAKRANSSVCIAMLDLDHFKQV 426

Query: 335 NDRHGHPMGDRVIKSLALFLKQRLRKTDFIGRYGGEEFAIVMPNTALDAAHKVLDEIRRR 394
           ND +GH  GD+V+ + A  L+Q LR  DF+GRYGGEEF +V+P+         ++ IR  
Sbjct: 427 NDTYGHSGGDKVLLAFAHLLQQSLRAADFMGRYGGEEFMLVIPDMPAPLVIAKVNAIRES 486

Query: 395 FAEILYPAQPRDLQCTFSAGVVQLDEGLDALTMASAADEALYRAKHAGRNCVV 447
           F+ I++  +  + + T S G+    E  +       AD+ LY AK  GRN ++
Sbjct: 487 FSNIVFVEEGAEFKVTLSGGLAFSTECHEFQECLLLADKNLYEAKRTGRNRII 539