Pairwise Alignments

Query, 653 a.a., Methyl-accepting chemotaxis protein CtpL from Pseudomonas putida KT2440

Subject, 433 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  178 bits (451), Expect = 5e-49
 Identities = 112/344 (32%), Positives = 185/344 (53%), Gaps = 1/344 (0%)

Query: 310 LILLIALLIDTLQRRLARTLTGLAPALSRWAEGDFAQAIALGKTNRELHDIQESLNRLRQ 369
           LI++  +L+    R + R    L+  +   A+ + ++ I +   + E  D+   L + R+
Sbjct: 91  LIVVFVVLLLFAARVMLRQTQYLSDVIKLMAQRNLSEPIKMDCKD-EYGDVARELEKTRR 149

Query: 370 YLVELVGTIRHNAEQVAGSSHALAGMSAALHGGAERQAGDTGQIRDALGELEATIQQVAG 429
            L +L+      ++++   +  +    +     A+ +  +  Q+  A+ E+ +T+Q VA 
Sbjct: 150 QLQDLIKLQIDASQELTSLTEVMTMSMSETKDSAQEEFNEIDQLATAMSEMSSTVQTVAE 209

Query: 430 DASAAAEASRDAGRAVEQGQAVIGQSLSGLRELVDEVQGNARMIEQLAEESATIGGVLTV 489
            A  A+  + +A +  + GQ  +  ++S + EL  ++  +A+ + Q+ E    I  V+  
Sbjct: 210 HAQNASSLTENASQQAQTGQQFVKSTISKMSELSKDISSSAQAVNQVEERVVAISSVVGT 269

Query: 490 IRAIAEQTNLLALNAAIEAARAGEMGRGFAVVADEVRSLAQRTTGATGEIQALIDRLQQA 549
           IR+I+EQTNLLALNAAIEAARAGE GRGFAVVADEVR+LAQRT  AT EIQ +I +LQ +
Sbjct: 270 IRSISEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAQRTQNATVEIQEMISQLQSS 329

Query: 550 ARSSVAGMRAQLEHAEATANQAQAADGALDEIVCAIRTISDTAVRIADVTAQQSGAVSEI 609
           A S+V  M   +  A         A   LD IV  ++ ++D   +IA    QQS    E+
Sbjct: 330 ANSAVNLMEKSVVQAADGVELITNAGSELDGIVNQVQLLNDMNFQIAAAAGQQSNVAEEM 389

Query: 610 RDHSERIHELGEDNLQRIGEGRKQGEQLLSLGGELNRAVRAFRV 653
            ++   + EL E ++  + E  +  E + S   EL+R + AFRV
Sbjct: 390 NENLNNVRELVEGSVTVMTELLETSEIMQSNAEELDRKITAFRV 433



 Score = 37.0 bits (84), Expect = 2e-06
 Identities = 56/307 (18%), Positives = 124/307 (40%), Gaps = 41/307 (13%)

Query: 232 QEDIAVGLKRELQSLLNRYPAELQRTREQIERRAELAATTGQRLEAVQQAIAALEPEVRG 291
           Q +++  +K + +        EL++TR Q++   +L     Q L ++ + +     E + 
Sbjct: 122 QRNLSEPIKMDCKDEYGDVARELEKTRRQLQDLIKLQIDASQELTSLTEVMTMSMSETKD 181

Query: 292 QHAKIAAEVRIIQGLMIGLILLIALLIDTLQRRLARTLTGLAPALSRWAEGDFAQAIA-L 350
              +   E+  +   M  +   +  + +  Q   A +LT  A   ++  +      I+ +
Sbjct: 182 SAQEEFNEIDQLATAMSEMSSTVQTVAEHAQN--ASSLTENASQQAQTGQQFVKSTISKM 239

Query: 351 GKTNRELHDIQESLNRLRQYLV---ELVGTIRHNAEQVAGSSHALAGMSAALHGGAERQA 407
            + ++++    +++N++ + +V    +VGTIR  +EQ       L  ++AA+      +A
Sbjct: 240 SELSKDISSSAQAVNQVEERVVAISSVVGTIRSISEQT-----NLLALNAAIEAARAGEA 294

Query: 408 GD------------TGQIRDALGELEATIQQVAGDASAAAEASRDAGRAVEQGQAVIGQS 455
           G               + ++A  E++  I Q+   A++A      +      G  +I  +
Sbjct: 295 GRGFAVVADEVRNLAQRTQNATVEIQEMISQLQSSANSAVNLMEKSVVQAADGVELITNA 354

Query: 456 LSGLRELVDEV----------------QGNA--RMIEQLAEESATIGGVLTVIRAIAEQT 497
            S L  +V++V                Q N    M E L      + G +TV+  + E +
Sbjct: 355 GSELDGIVNQVQLLNDMNFQIAAAAGQQSNVAEEMNENLNNVRELVEGSVTVMTELLETS 414

Query: 498 NLLALNA 504
            ++  NA
Sbjct: 415 EIMQSNA 421