Pairwise Alignments

Query, 617 a.a., Acetoin catabolism regulatory protein from Pseudomonas putida KT2440

Subject, 448 a.a., Two Component, Sigma54 Specific, Transcriptional Regulator, Fis family (NCBI) from Rhodospirillum rubrum S1H

 Score =  220 bits (561), Expect = 9e-62
 Identities = 140/341 (41%), Positives = 197/341 (57%), Gaps = 11/341 (3%)

Query: 274 DIDQLRRVSASSAQRLPGLGGLYGRVSAPQQRQRAQPLRQA--QDTRIEQHLRLATRVKD 331
           DI+ LR ++A +A     L  L        +   A PL     +   I+   ++  RV  
Sbjct: 113 DIEHLRLITARAAH----LRRLEEENRQLARAGHAGPLANVIGESAAIQAVCQMVRRVAS 168

Query: 332 CNLAVLVLGETGAGKEVFARQLHQQSQRCDGPFVTLNCAAIPESLIESELFGYVAGAFTG 391
             + VL+LGE+G GKEVFA  LHQ S R   PFV +NCAAIPE+L+ESELFG+  GAFTG
Sbjct: 169 TTVNVLLLGESGTGKEVFAHSLHQLSGRAGQPFVAINCAAIPENLLESELFGHEKGAFTG 228

Query: 392 ASSKGMQGLLQQADGGTLFLDEIGDMPLNLQTRLLRVLAEGEVAPLGAARRERVDIQVIC 451
           A  +   G +QQA+GGTLFLDEIGDMP  LQ +LLR L    +  +G  +   VD++++ 
Sbjct: 229 ALRQ-TTGKIQQANGGTLFLDEIGDMPPPLQAKLLRFLQSRVIERVGGRQSLEVDVRIVS 287

Query: 452 ATHRDLAAMVEDGRFREDLYFRLANARFELPPLRERDDRLGLIHQLLAEE-AAACGVEVV 510
           AT+RDL A++E G FREDLY+RL   +  LPPLR+R +   L+ Q   +  AA+ G +V 
Sbjct: 288 ATNRDLGALIEKGEFREDLYYRLDEVKIALPPLRDRIEDAPLLAQYFLDSFAASMGRKVT 347

Query: 511 -LADDALQALLVYRWPGNLRQLRQVLRYACAVSEGGQVRLQDLPQEVRGEAVGSAESGVS 569
             + DA  AL  + WPGN+R+L   ++ A  ++EG  V  +D+  ++ G A+ +      
Sbjct: 348 GFSSDAQVALSAHPWPGNVRELENRVKRAVVLAEGRLVTAKDM--DLVGGAMPTLRESRR 405

Query: 570 CPARQLLLDALIRHRWKPADAARALGISRATLYRRVHEHRI 610
               Q +  AL+      + AA+ LGISR TLY  +  H I
Sbjct: 406 RADYQAVTTALLLAGNNLSLAAKYLGISRPTLYDLIETHNI 446