Pairwise Alignments

Query, 617 a.a., Acetoin catabolism regulatory protein from Pseudomonas putida KT2440

Subject, 628 a.a., Fis family GAF modulated sigma54 specific transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score =  295 bits (756), Expect = 3e-84
 Identities = 205/612 (33%), Positives = 319/612 (52%), Gaps = 47/612 (7%)

Query: 32  ILDSWRRSMDVYRLDPGSQQGPRILSQSLLNECRERAELFLRIASDAVARLHERVRGADY 91
           + DSW+RS+     +  + +  R+    L  +  +  +L   + S A+   ++ +  ++ 
Sbjct: 23  LTDSWQRSLGAGLSEFRAGEDLRLTRSELKYKHEQYQQLIELVQSHALPLFNQLMAHSNS 82

Query: 92  CVLLTDAQGRTIDYRVESAIRNDCRKAGLYLGTCWSEGEEGTCGVAAVLTSKAPVTVHKR 151
            +LL+DA G  + +   S   +      L +G  W E  +GT  +   LT+K  V+V   
Sbjct: 83  RLLLSDADGYVLKHWGVSRYSSKLADVALDIGVNWLEKYKGTNAIGTALTAKQAVSVVGE 142

Query: 152 DHFRAAFIGLTCTAAPVFDPLGELLGVVDVSALQSPDDRRSQHLIRQLVEQTAREIENAF 211
            HF      ++CTA P+F P GE+LGV+D+++ Q    R SQ  +  LV   A+++E A 
Sbjct: 143 QHFIRQNRFMSCTACPIFSPQGEMLGVLDITSEQQ---RHSQQTL-MLVSSLAQQVETAL 198

Query: 212 FMHSAQGHWVMRAHGTPGYVESQPDYLLAWDADGRLQAINSLARQRLVE-RLG-RLPEHI 269
             H    H+ +     P  + S    ++   +DGR+   N +A+Q L + +LG  L +H+
Sbjct: 199 LCHLPDSHYRIDFAAQPSLLNSGWQGIVIASSDGRIVGCNPMAKQLLSQAKLGDSLDQHL 258

Query: 270 GELFD-IDQLRRVSASSAQRLPGLGGLYGRVSAPQQRQRAQPLRQA----QDTRIEQHLR 324
           G+ +       R SA   Q       L    +   +  + +PL Q     +D  +E+  +
Sbjct: 259 GDNWARAGGFHRDSALHVQTQ----ALALTQTKSTRTLQDKPLNQLGVRFRDPLLERAWQ 314

Query: 325 LATRVKDCNLAVLVLGETGAGKEVFARQLHQQSQRCDGPFVTLNCAAIPESLIESELFGY 384
            A +V    + +LVLGETG GKE F ++LH QS R   P V +NCAA+P  L+ESELFGY
Sbjct: 315 QANKVITKQIPLLVLGETGVGKEQFVKKLHAQSTRRAQPIVAVNCAALPAELVESELFGY 374

Query: 385 VAGAFTGASSKGMQGLLQQADGGTLFLDEIGDMPLNLQTRLLRVLAEGEVAPLGAARRER 444
            AGAFTGA+  G  G ++QA GG LFLDEIG+MPL  Q+RLLRVL E EV P+G+ +  +
Sbjct: 375 QAGAFTGANRTGFIGKIRQAHGGFLFLDEIGEMPLAAQSRLLRVLQEREVVPVGSNQSFK 434

Query: 445 VDIQVICATHRDLAAMVEDGRFREDLYFRLANARFELPPLRERDDRLGLIHQLLAEEAAA 504
           VDIQ+I ATH DL ++V  G FR+DL++RL   +  LP LRER D   +IH+L     ++
Sbjct: 435 VDIQIIAATHMDLESLVAQGLFRQDLFYRLNGLQVRLPALRERQDIERIIHKLHRRHRSS 494

Query: 505 CGVEVVLADDALQALLVYRWPGNLRQLRQVLRYACAVSEGGQV------------RLQDL 552
                 L  + L  L+ Y WPGNLR+L  +++ AC ++EG  V            +L +L
Sbjct: 495 A---QTLCTELLAQLMRYDWPGNLRELDNLMQVACLMAEGEAVLEINHLPDYLAQKLMNL 551

Query: 553 PQEVR-----GEAVGSAESGVSCPARQLLLDAL-------IRHRWKPAD-----AARALG 595
             E +      +A  +A       +  + +D+L       +   ++  D      A+ LG
Sbjct: 552 ACEPQTLTEVADAEATAHPHELVESSSVTIDSLHGTINLNVLQAYRACDGNVSQCAKRLG 611

Query: 596 ISRATLYRRVHE 607
           ISR  LYR++ +
Sbjct: 612 ISRNALYRKLKQ 623