Pairwise Alignments

Query, 449 a.a., UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase from Pseudomonas putida KT2440

Subject, 433 a.a., UDP-N-acetylmuramoylalanine--D-glutamate ligase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 67.8 bits (164), Expect = 7e-16
 Identities = 105/412 (25%), Positives = 161/412 (39%), Gaps = 63/412 (15%)

Query: 32  ANVYPPMSTQLEAQGIELTQG-YDPAQLDPAPDLVVI-GNAMSRGNPAVEYVLNKGLPYV 89
           ANV    +      G+E+  G +D A    A  +V   G A++   P   Y+   G P V
Sbjct: 48  ANVPATFAEWAAGAGVEIVCGAHDAAHFADAAVVVPSPGVAVATLRP---YLPATGGPEV 104

Query: 90  SGPQWLADHVLQGRWVLAVAGTHGKTTTSSMLAWVLEHAGMSPGFLIGGVPQNFSASARL 149
                LA   L G  V+AV GT GKTTT S+ A +L   G+S  FL G +          
Sbjct: 105 MAEMELAWRELSGEPVIAVTGTSGKTTTVSLCAHMLRTQGLSV-FLGGNI---------- 153

Query: 150 GDTPF--FVVEADEYDSAFFDKRSKFVH----YHPRTAILNNLEFDHADIFPDLASIERQ 203
             TP   +V+E    D    +  S  +     + PR A+L N+  +H D   D+      
Sbjct: 154 -GTPLCEYVLEGKRADVLVIEISSFQLQTCSTFRPRVAMLLNITANHLDYHADMQEYIDA 212

Query: 204 FHHLVRTIPSEGLVIHPTTEQALERVIGMGCWTPVQTTGEGGQWQARLLSPDGSRFEVLF 263
              L R    + L +                          G+  A L+   G +   + 
Sbjct: 213 KFRLFRCQDEDDLAVF-------------------------GEGLAPLVDRYGVKARRVT 247

Query: 264 EGEVQGVVDWALTGQHNVANALATLAAARHVGVVPAMGIDGLSAFKSVKRRMEKVAEVQG 323
                   +  L G HN ANA A   AAR  GV     +  ++ F  +  R+E+VAE  G
Sbjct: 248 FRATDRFAESRLFGAHNRANAEAAWTAAREFGVTLENALQAVATFAPMPHRLEQVAERGG 307

Query: 324 VTIYDDFAHHPTAIATTLDGLRKRVG--EAPVIAVIEPRSNSMKLGAHRDGLPESVNDAD 381
           V   +D      +  TT+  LR  +   + PV+ +    +     G   +GL   V +  
Sbjct: 308 VLYVND------SKCTTVSALRVALEAFDRPVLLL----AGGKFKGGDLEGLIPLVRERV 357

Query: 382 QVIWYAPANLGWDLAATAAQCKVPSVVADSLEAIIERVKGQARPGTQVVIMS 433
           + +    A+   ++   A +  VP     +LE  + R    AR G +VV+M+
Sbjct: 358 RAVMLFGASR--EVFEAAWRDVVPMTWDATLEEAVRRAASAARQG-EVVLMA 406



 Score = 24.3 bits (51), Expect = 0.008
 Identities = 28/87 (32%), Positives = 35/87 (40%), Gaps = 6/87 (6%)

Query: 221 TTEQALERVIGMGCWTPVQTTGEGGQWQARLLSPDGSRFEVLFEGEVQGV----VDWAL- 275
           T ++   R I  G    V  TG  G   ARLL   G+R  VL E +   V     +WA  
Sbjct: 2   TCDKEKTRGIRPGDIAVVVGTGRSGVAAARLLHAKGARVRVL-ERDAANVPATFAEWAAG 60

Query: 276 TGQHNVANALATLAAARHVGVVPAMGI 302
            G   V  A      A    VVP+ G+
Sbjct: 61  AGVEIVCGAHDAAHFADAAVVVPSPGV 87