Pairwise Alignments

Query, 671 a.a., sigma-54 dependent transcriptional regulator from Pseudomonas putida KT2440

Subject, 621 a.a., Transcriptional activator of acetoin dehydrogenase operon AcoR from Pseudomonas fluorescens FW300-N2E2

 Score =  433 bits (1114), Expect = e-125
 Identities = 268/641 (41%), Positives = 359/641 (56%), Gaps = 62/641 (9%)

Query: 30  IARSWLRCLEDYHLDPAVIEAPVVLEHGRLLESRERLHQVLQIADHEMNSLHQQLSGAGH 89
           I  SW R LE +HLDP  ++ P +L    L + RER    L IA  E+  LH ++  A +
Sbjct: 32  ILDSWRRSLEQHHLDPGSLQGPRILSQDVLKQCRERSELFLNIASEEVARLHGRVRDADY 91

Query: 90  AVLLTDARGVILNCVSAPAERRSFERAGLWLGADWSEAREGTNGIGTCLVERQALTIHQN 149
            VLLTDA+G  ++       R    +AGL+LG  WSE  EGT G+   L  +  +T+H+ 
Sbjct: 92  CVLLTDAQGQTIDYRVETTIRNDCRKAGLYLGTCWSEGEEGTCGVAAVLTAKAPVTVHKR 151

Query: 150 EHFRGRHTGLTCSASPVFDPHGDLLAVLDVSSARPDVSRQSQFHTMALVNLSAKMIESCY 209
           +HFR    GLTCSA+PVFDP G+LL VLDVS+ R    R+SQ     +V  SA+ IE  +
Sbjct: 152 DHFRAAFIGLTCSAAPVFDPQGELLGVLDVSAVRSPDDRRSQHLIRQMVVQSAREIEQAF 211

Query: 210 FLRHFEQQWLLRFHLQAESVGLFSEGLLAFDGDGRICAANQSALNLLGTVRGGVLGKPLE 269
           F+   +  W+LR H  A  V    + L A+D DG + A N +A   L     G L + + 
Sbjct: 212 FMSSAQGYWVLRAHRNAGYVDSQPDFLFAWDDDGCLQALNPAARQYL-LQHYGQLPQHIG 270

Query: 270 CFFACSHDEMFSRATPGGSAVWPLRTLDGRQVFASLRGQARAPVWSVPAAQPRPAGEVEP 329
             F     ++  RA         L +LD      ++ G+  AP      A  R    V P
Sbjct: 271 QVF---DQQLLHRARDES-----LCSLD-----HAMHGRLSAP---RQRASSRSRVAVTP 314

Query: 330 LVCLLDPALQNDFRRSVRVFERDVPLLLRGETGCGKEAFAQAVHQASERRGKPFVAINCA 389
           L   +DP L +  R +VRV +R++P+L++GETG GKE FA+ +HQAS+RR +PFVA+NCA
Sbjct: 315 LE--IDPRLADSLRLAVRVKDRNLPVLIQGETGSGKEVFARQLHQASQRRDRPFVALNCA 372

Query: 390 SIPESLIESELFGYRGGSFTGARKEGMRGKLLQADGGTLLLDEIGDMPLALQTRLLRVLE 449
           +IPESLIESELFGY  G+FTGA  +GM+G L QADGGTL LDEIGDMPLALQTRLLRVL 
Sbjct: 373 AIPESLIESELFGYVAGAFTGASAKGMQGLLQQADGGTLFLDEIGDMPLALQTRLLRVLA 432

Query: 450 ERQVVPIG-GEPQAVDVRIVSATHRDLLERVEQGSFREDLYYRLNGLEVALPAVRERSDK 508
           E +V P+G    +AVD++++ ATHRDL   V  G FREDLY+RL G    LP +RERSD+
Sbjct: 433 EGEVAPLGASRRKAVDIQVICATHRDLETLVAAGEFREDLYFRLGGARFQLPPLRERSDR 492

Query: 509 AQLLDFLLRQETQ--GQWIDIEPRARQALLAFNWPGNVRQMRNVLRTLVALCEDARITFA 566
             L++ +L +E+   G  + +   A + LL ++WPGNVRQ+R+VLR   A+CE + +  +
Sbjct: 493 LALINRILAEESALCGATVQLSGAALECLLGYHWPGNVRQLRHVLRYACAVCEASVVQLS 552

Query: 567 DLPAVIRTSPPLAGVGEPAKMSDQEMEGEGVALVRGQARSHRSGGAAEIEGESAGTEVLL 626
            LP  +                                  H +  A        G E   
Sbjct: 553 HLPESM----------------------------------HHTDAA------DHGPEPSA 572

Query: 627 DAERQALKEVLEAKHWHLTRVAEHLGISRNTLYRKLRKHGI 667
             ERQAL + L    W  T  A  LGISR TLYR++  HGI
Sbjct: 573 SPERQALLDALVRHRWKPTAAARALGISRATLYRRVNLHGI 613