Pairwise Alignments

Query, 671 a.a., sigma-54 dependent transcriptional regulator from Pseudomonas putida KT2440

Subject, 646 a.a., transcriptional activator of acetoin/glycerol metabolism from Dechlorosoma suillum PS

 Score =  396 bits (1018), Expect = e-114
 Identities = 259/663 (39%), Positives = 360/663 (54%), Gaps = 45/663 (6%)

Query: 8   RHARQVHSVAHGGAGEGGSDPSIARSWLRC----LEDYHLDPAVIEAPVVLEHGRLLESR 63
           R AR++  +  G    G  D  + RSW R     LE    +P   E P + E   L ++ 
Sbjct: 14  RQARRLF-LEQGELPPGLVDERLLRSWHRSRGAGLEPVGRNP---ETPRLSEQ-HLRQAL 68

Query: 64  ERLHQVLQIADHEMNSLHQQLSGAGHAVLLTDARGVILNCVSAPAERRSFERAGLWLGAD 123
           ER  + +  A+  M  L+ Q+  +   V+L D RG++++ +  P      ER  L  GA 
Sbjct: 69  ERHQEFVAHAEPVMEYLYAQVQASHSMVVLADNRGLLVHALGDPDFLGKAERVALAPGAS 128

Query: 124 WSEAREGTNGIGTCLVERQALTIHQNEHFRGRHTGLTCSASPVFDPHGDLLAVLDVSSAR 183
           W E   GTN IGT L E  A+ IH  EHF  R+T LTC+A+P+ DP G LL  LD+S   
Sbjct: 129 WHEQHRGTNAIGTALAEGAAVEIHGAEHFLERNTFLTCAAAPILDPSGKLLGALDISGDH 188

Query: 184 PDVSRQSQFHTMALVNLSAKMIESCYFLRHFEQQWLLRFHLQAESVGLFSEGLLAFDGDG 243
               R    HT  LV  +A+MIE+   L    +   L  H +AE +G  +EG+LA   DG
Sbjct: 189 ----RSHHPHTQGLVRTAAQMIENRLLLSRHRRHIRLHLHPRAEGIGTVAEGVLALSEDG 244

Query: 244 RICAANQSALNLLGTVRGGVLGKPLECFFACSHDEMFSRATPGGSAVWPLRTLDGRQVFA 303
            I  AN++AL +LG     +   PLE       +++       G     + T  G ++F 
Sbjct: 245 WIVGANRAALAMLGLQPADLGATPLERVLDSRSEDLLDWGRRQGQQALLVNTRRGGRLFL 304

Query: 304 SLRGQARAPVWSVPAAQPRPAGEVEPLVCLLDPALQNDFRRSVRVFERDVPLLLRGETGC 363
            +    +AP+    AA   P  +    +   D  L+    ++ +V  + +PLLL GE+G 
Sbjct: 305 QIHA-GKAPIPVGTAAASTPPQDALAALDTGDARLKAALDKARKVAGKPIPLLLHGESGV 363

Query: 364 GKEAFAQAVHQASERRGKPFVAINCASIPESLIESELFGYRGGSFTGARKEGMRGKLLQA 423
           GKE  AQA+H++S RR  PFVA+NCA++PE+LIE+ELFGY  G+F+GARKEG  G+L +A
Sbjct: 364 GKELLAQAIHRSSPRREGPFVAVNCAALPENLIEAELFGYAPGAFSGARKEGSPGRLREA 423

Query: 424 DGGTLLLDEIGDMPLALQTRLLRVLEERQVVPIG-GEPQAVDVRIVSATHRDLLERVEQG 482
            GGTL LDEIGDMPL LQ+RLLRVL+ERQV P+G G+P AVD  +V ATHR L + VE G
Sbjct: 424 HGGTLFLDEIGDMPLNLQSRLLRVLQERQVTPLGSGKPVAVDFALVCATHRPLRQEVEAG 483

Query: 483 SFREDLYYRLNGLEVALPAVRERSDKAQLLDFLLRQETQGQWIDIEPRARQALLAFNWPG 542
            FR DLYYRLNGL + LPA+RERSD + L+  LL +   G+ + + P   +A   + WPG
Sbjct: 484 RFRADLYYRLNGLTLTLPALRERSDFSALVARLLAEMAPGRSLALAPAVARAFADYAWPG 543

Query: 543 NVRQMRNVLRTLVALCE--DARITFADLPAVIRTSPPLAGVGEPAKMSDQEMEGEGVALV 600
           N+RQ+ N LRT  AL E  +  I +  LP  +                 +E++   +A  
Sbjct: 544 NLRQLANALRTATALLEADEECIDWPHLPDDLA----------------EELQQRPLA-- 585

Query: 601 RGQARSHRSGGAAEIEGESAGTEVLLDAERQALKEVLEAKHWHLTRVAEHLGISRNTLYR 660
                      AA    E A  + L +  R A++  + A   +L+  A  LGISRNTLYR
Sbjct: 586 ---------ADAAATMAEPA-PDRLQEVSRLAIQRAVAAARGNLSEAARRLGISRNTLYR 635

Query: 661 KLR 663
           KL+
Sbjct: 636 KLK 638