Pairwise Alignments

Query, 671 a.a., sigma-54 dependent transcriptional regulator from Pseudomonas putida KT2440

Subject, 594 a.a., Fis family transcriptional regulator from Klebsiella michiganensis M5al

 Score =  222 bits (566), Expect = 3e-62
 Identities = 159/498 (31%), Positives = 251/498 (50%), Gaps = 58/498 (11%)

Query: 200 LSAKMIESCYFLRHFEQQWLLRFHLQAESVG------------LFSEGLLAFDGDGRICA 247
           ++A + E   ++RH    ++ RF LQ  +VG               +G+L    D  +  
Sbjct: 126 INANIQEFSDYVRHVSTIFVSRF-LQERAVGDNIHKIFLTMIENMDQGVLVVGNDQIVKF 184

Query: 248 ANQSALNLLGTVRGGVLGKPLECFFACSHDEMFSRA---------TPGGSAVWPLRTLDG 298
           ANQ+AL ++   +G V+GK ++ F   + ++ F                  +  L  +  
Sbjct: 185 ANQAALKIMSVTQGQVIGKAIQ-FQPLTFEDNFKHGHMQHIISFDDRKELIIGQLHAVQD 243

Query: 299 RQVFASLRGQARAPVWSVPAAQPRPAGEVEPLVCLLDPALQNDFRRSVRVFERDVPLLLR 358
           + +F     Q+ +      + Q  P  ++E +V    P  Q     S RV      +++ 
Sbjct: 244 QWLFLMAFHQSHSTA-DFSSGQEGP--QIEAMVGECRPMRQLKKLIS-RVAPSPSSVMIA 299

Query: 359 GETGCGKEAFAQAVHQASERRGKPFVAINCASIPESLIESELFGYRGGSFTGARKEGMRG 418
           GE+G GKE  A+A+H+ S+R  KPF+AINCA+IPE L+ESELFGY  G+FTGA   G  G
Sbjct: 300 GESGTGKEVVARAIHKLSDRHAKPFIAINCAAIPEQLLESELFGYVKGAFTGASANGKTG 359

Query: 419 KLLQADGGTLLLDEIGDMPLALQTRLLRVLEERQVVPIG-GEPQAVDVRIVSATHRDLLE 477
            +  A+ GTL LDEIGDMPL LQ +LLR +E R++ P+G   P  VD+RI+SAT+++L  
Sbjct: 360 LIQAANSGTLFLDEIGDMPLTLQAKLLRAIESREIQPVGASHPVQVDIRIISATNQNLEL 419

Query: 478 RVEQGSFREDLYYRLNGLEVALPAVRERSDKAQLLDFLLRQETQGQWIDIEPRARQALLA 537
            + +G FREDLYYRLN + + LP +RER +  +LL         G+   + P   Q ++ 
Sbjct: 420 YIAEGKFREDLYYRLNVIPLRLPPLRERQEDIELLIHYFLHLHTGRLNLVYPGVAQDVID 479

Query: 538 F----NWPGNVRQMRNVLRTLVALCEDAR-ITFADLPAVIRTSPPLAGVGEPAKMSDQEM 592
           F     WPGN+R++ N++  LV +      I  + LP  + +S  LA             
Sbjct: 480 FLKRYRWPGNIRELSNLMEYLVNVVPSGEIIDMSLLPPNLLSSSELA------------- 526

Query: 593 EGEGVALVRGQARSHRSGGAAEIEGESAGTEVLLDAERQALKEVLEAKHWHLTRVAEHLG 652
                      ++   S  AA    +      L + ERQ +++ L +++ +  + A+ LG
Sbjct: 527 -----------SQPPSSASAAATLAQEENVTALEEMERQMIRDAL-SRYSNKKQAADELG 574

Query: 653 ISRNTLYRKLRKHGITRG 670
           I   TLYRK++K+ +  G
Sbjct: 575 IGIATLYRKIKKYSLAAG 592