Pairwise Alignments

Query, 230 a.a., putative Transcriptional regulator PfeR from Pseudomonas putida KT2440

Subject, 225 a.a., Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain from Pseudomonas stutzeri RCH2

 Score =  139 bits (351), Expect = 3e-38
 Identities = 90/222 (40%), Positives = 119/222 (53%), Gaps = 2/222 (0%)

Query: 3   TSLLLAEDDPRLLQDLDRHFRNRGFLVHACASGTQALNAIQQSQFELVLLDIMLPGIDGL 62
           + LLL +DD  L + L       GF+ HAC  G  A  A+ + Q   V+LD+MLP   GL
Sbjct: 2   SELLLIDDDQELCELLISWLAQEGFVAHACHDGKSARQALAEHQPAAVVLDVMLPDGSGL 61

Query: 63  SLLDALRRQQA-VPVMLMSALGAEQDRISGFTRGADDYLPKPFSLAELDARVDALLRRVA 121
            LL  LR +   +PV+++S  G   DRI G   GADDYL KP    EL AR+ A+LRR +
Sbjct: 62  ELLKQLRSEHPQLPVLMLSGRGEPLDRILGLELGADDYLAKPCDPRELTARLRAVLRR-S 120

Query: 122 FDRGTALRADVGEVMLDHDRQDVIHNGNAAGLTASEFRLLVTLLAHPDEALSKPFLYQTV 181
               T  + ++G++     R      G    LT SE R+L  LLA P E + K  L Q  
Sbjct: 121 QPTATPSQVELGDLCYSPARGIASVGGAEVSLTLSEGRILEALLAQPGEPMDKQALAQHA 180

Query: 182 LHRAYTRLDRGLDVHVCNLRRKLADINAQHLQIQAVRGQGYI 223
           L R  T  DR LD+HV NLRRKL      + +I A+R +GY+
Sbjct: 181 LGRKLTLYDRSLDMHVSNLRRKLGPHADGNPRIVALRSRGYL 222