Pairwise Alignments

Query, 230 a.a., putative Transcriptional regulator PfeR from Pseudomonas putida KT2440

Subject, 228 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  137 bits (346), Expect = 1e-37
 Identities = 84/227 (37%), Positives = 125/227 (55%), Gaps = 5/227 (2%)

Query: 5   LLLAEDDPRLLQDLDRHFRNRGFLVHACASGTQALNAIQQSQFELVLLDIMLPGIDGLSL 64
           +LL +DD  L   L    +  GF +     G   L A+   + +L+LLD+M+P ++G+  
Sbjct: 4   ILLIDDDTELTSLLTEVLQYEGFEISQANDGEAGLAAVSD-EIDLILLDVMMPKLNGMET 62

Query: 65  LDALRRQQAVPVMLMSALGAEQDRISGFTRGADDYLPKPFSLAELDARVDALLRRVAFDR 124
           L  LR + A PV++++A G E DR+ G   GADDYLPKPFS  EL AR+ A+LRR   + 
Sbjct: 63  LKRLREKWATPVLMLTAKGEEIDRVIGLELGADDYLPKPFSDRELLARIRAILRRTQ-NG 121

Query: 125 GTALRADVGE---VMLDHDRQDVIHNGNAAGLTASEFRLLVTLLAHPDEALSKPFLYQTV 181
            T   +DV E   + +   +Q+    G    LT +EF LL   +  P   L+K  L   V
Sbjct: 122 LTPKNSDVIECQDIQVYPGKQEAYCQGQLLELTTTEFALLTHFVQSPGATLTKEMLSIEV 181

Query: 182 LHRAYTRLDRGLDVHVCNLRRKLADINAQHLQIQAVRGQGYILVDTE 228
           L +     DR +D+HV NLR+KL +      +I+ +RG+GY++V  E
Sbjct: 182 LGKHLAAFDRAIDMHVSNLRKKLPERPDGKARIKTLRGRGYLMVQEE 228