Pairwise Alignments

Query, 295 a.a., farnesyl diphosphate synthase from Pseudomonas putida KT2440

Subject, 317 a.a., polyprenyl synthetase family protein from Methanococcus maripaludis S2

 Score =  130 bits (327), Expect = 4e-35
 Identities = 92/229 (40%), Positives = 130/229 (56%), Gaps = 13/229 (5%)

Query: 30  RLYAAMRYSVMNGGKRVRPLLAYAACEALGAPAEQANGAACAVELIHAYSLVHDDLPAMD 89
           +LY A ++ ++ GGKRVRP L+            +    A +VELIH Y+LVHDD+  MD
Sbjct: 24  KLYGASKHLLLAGGKRVRPYLSILTYLLKKDELTEIMAPALSVELIHNYTLVHDDI--MD 81

Query: 90  DDDLRRGQPTTHKAFDEACAILAGDGLQSLAFSALLDPCLSPQIDSIRLAMVQVLAKAAG 149
           +DD RRG PT H  + E  AILAGD L + AF AL +   S +   +    ++VL+KA  
Sbjct: 82  NDDQRRGIPTVHTVYGEPIAILAGDLLYAKAFEALSNIEDSNKAHEV----LKVLSKAC- 136

Query: 150 PAGMVGGQAIDLGSVGQ--KLDQQALEFMHRHKTGALIEASVRLGALASARAEPVQLDAL 207
              +  GQ  D+    +   LD+  LE + + KTGALI A V +GA+  A   P + +AL
Sbjct: 137 -VEVCEGQTEDMEFEERFPTLDEY-LEMISK-KTGALIVAPVEIGAVM-ADCTPEEREAL 192

Query: 208 QTYAQAIGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYPALLGLE 256
             YA+ IG+ FQ+QDD+LD+  D  T+GK  G+DI   K T   +  +E
Sbjct: 193 CNYAKRIGMTFQIQDDVLDLIGDQKTIGKPVGSDIVEGKKTMMVIHAME 241