Pairwise Alignments

Query, 631 a.a., 1-deoxyxylulose-5-phosphate synthase from Pseudomonas putida KT2440

Subject, 325 a.a., alpha keto acid dehydrogenase complex, E1 component, beta subunit (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 54.7 bits (130), Expect = 6e-12
 Identities = 56/238 (23%), Positives = 103/238 (43%), Gaps = 25/238 (10%)

Query: 369 RYFDVAIAEQHAVTLAAGMACEGSKPVVAI-YSTFLQRAYDQLIHDVAV------QNLDV 421
           R F+  + EQ     A G+A  G   V  I ++ ++  A+DQ++++ A          +V
Sbjct: 52  RCFNTPLTEQGIAGFANGLASNGMTAVAEIQFADYIFPAFDQIVNESAKFRYRSGNEFNV 111

Query: 422 LFAIDRA----GLVGEDGPTHAGSYDLSYLRCIPGMLVMTPSDENELRKMLSTGHLYNGP 477
              + R     G+ G  G  H+ S + +Y    PG+ V+ P +  + + +L        P
Sbjct: 112 GSLVFRTPYGGGIAG--GHYHSQSPE-AYFTQTPGLKVVVPRNPAQAKGLLLASIRDKNP 168

Query: 478 AAVRYP----RGTGPNAPISGDLQPLEIGKGVVRRQGEKVALLVFGVQL-----AEAMQV 528
                P    R +  + P +GD + +E+GK  V R+G+ + L+ +G Q+     A  M  
Sbjct: 169 VVFFEPKRLYRASVGDVP-AGDYE-IELGKAEVLREGKDITLVAWGAQMEIIEKAADMAA 226

Query: 529 AEQINATVVDMRFVKPLDEALVLELAGSHELLVTIEENAIMGGAGAAVGEFLASQAVL 586
            E I+  ++D+R + P D   V +       L+   E  + GG    +   +  +  L
Sbjct: 227 KEGISCEIIDLRTLAPWDVNTVADSVKKTGRLLVNHEAPLTGGFAGEIAATIQQECFL 284