Pairwise Alignments

Query, 236 a.a., putative ABC efflux transporter, ATP-binding protein from Pseudomonas putida KT2440

Subject, 235 a.a., ABC-type antimicrobial peptide transport system, ATPase component from Pseudomonas stutzeri RCH2

 Score =  341 bits (874), Expect = 8e-99
 Identities = 179/235 (76%), Positives = 193/235 (82%), Gaps = 1/235 (0%)

Query: 1   MNQPLIDLHDLVFAWPGHPPLLDIPALRLDAGEALFLKGPSGSGKTTLLGLLGGVNVPVQ 60
           M  PL+ +  L FAWP    LLDIP  RL+ GE+LFLKGPSGSGKTTLLGL+GGV    +
Sbjct: 1   MTAPLLAIDSLGFAWPRQAELLDIPTFRLERGESLFLKGPSGSGKTTLLGLIGGVQKAGR 60

Query: 61  GRIQLLGQDLGSLSQGARDRFRVDHTGYIFQQFNLLPFLSVRENVELPCRFSRSRKARAE 120
           G I+LL  DLG LS GARDRFRVDHTGYIFQQFNLLPFLSVRENV LPC FSR R  RA 
Sbjct: 61  GSIRLLDHDLGRLSAGARDRFRVDHTGYIFQQFNLLPFLSVRENVGLPCHFSRLRAERAR 120

Query: 121 QRHGSVDQAASTLLTHLGLGDPAMLARRADSLSIGQQQRVAAARALIGQPELVIADEPTS 180
           +RHGS D AA++LL HLGL  P +  RRAD+LSIGQQQRVAAARALIGQPELVIADEPTS
Sbjct: 121 KRHGSTDAAAASLLEHLGL-SPELFERRADALSIGQQQRVAAARALIGQPELVIADEPTS 179

Query: 181 ALDADTREAFIRLLFDECRAAGASLLFVSHDQSLAPLFDRHLSLAELNRAAKPRE 235
           ALDAD+REAF+ LLF ECRAAGASLLFVSHDQSLAPLFDR LSLAELNRAA   E
Sbjct: 180 ALDADSREAFLHLLFSECRAAGASLLFVSHDQSLAPLFDRSLSLAELNRAASNPE 234