Pairwise Alignments

Query, 236 a.a., putative ABC efflux transporter, ATP-binding protein from Pseudomonas putida KT2440

Subject, 233 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  132 bits (331), Expect = 8e-36
 Identities = 85/205 (41%), Positives = 121/205 (59%), Gaps = 10/205 (4%)

Query: 22  LDIPALRLDAGEALFLKGPSGSGKTTLLGLLGGVNVPVQGRIQLLGQDLGSLSQGARDRF 81
           LD   L +  GE L + GPSGSGK+TL+ +LG ++ P  GR QL G  + SLS       
Sbjct: 29  LDGVDLTIRHGEFLAILGPSGSGKSTLMNVLGCLDKPTAGRYQLDGHPVDSLSTQQLAAI 88

Query: 82  RVDHTGYIFQQFNLLPFLSVRENVELPCRFSRSRKARAEQRHGSVDQAASTLLTHLGLGD 141
           R    G++FQ FNLL + S  +NV LP  ++   KA+  +R       A+ LLT +GL D
Sbjct: 89  RNQKIGFVFQSFNLLEYASALDNVALPLVYA-GVKAKDRRRR------ATELLTRVGLAD 141

Query: 142 PAMLARRADSLSIGQQQRVAAARALIGQPELVIADEPTSALDADTREAFIRLLFDECRAA 201
              L  + + LS GQ+QRVA ARALI QP++++ADEPT ALD+ +  A I  LF+E    
Sbjct: 142 --RLDHKPNQLSGGQKQRVAIARALINQPQILLADEPTGALDSKS-GAEIEALFNELHRE 198

Query: 202 GASLLFVSHDQSLAPLFDRHLSLAE 226
           G +++ V+HD  LA    R +++ +
Sbjct: 199 GRTIIVVTHDNELAKRTKRIVTIRD 223