Pairwise Alignments

Query, 421 a.a., putative ABC efflux transporter, permease protein from Pseudomonas putida KT2440

Subject, 420 a.a., Protein of unknown function DUF214 (NCBI) from Rhodospirillum rubrum S1H

 Score =  132 bits (332), Expect = 2e-35
 Identities = 124/430 (28%), Positives = 187/430 (43%), Gaps = 37/430 (8%)

Query: 3   LLRLALASLANRRFTAFLTAFAIALSVCLLLAVERVRTEARASFASTISGTDLIVGARSG 62
           +LR   A LA RR+ A      IAL+  L + V       R   A   +  DL++GA   
Sbjct: 1   MLRFVFADLATRRWGAAALVVIIALATGLGVMVTLQERALRLGSARAAAAFDLVIGAPGS 60

Query: 63  SVNLLLYSVFRIGNATNNIRWDSFQHYAQDPRVKWAIPISLGDSHRGYRVMGTTTDYFSH 122
              L+L SVF        +  +     A DPRV +A P+  GD    + ++GTT D  S 
Sbjct: 61  ETQLVLSSVFLQAAPLTLMPGNVLAKLAADPRVAYAAPVGFGDFVGDHPIVGTTLDLVSG 120

Query: 123 YQYGRRQHLQLSQGREFANDPFEVVLGAEVAEALHYKLGDKLVLAHGVAAISLVKHDDKP 182
                     +++GR F     E V+GA+V       LG ++   HG A      H    
Sbjct: 121 LG-------GVTEGRGF-EKLSEAVIGAKV----EISLGQQIQPMHGHAEEGGEAHAGVS 168

Query: 183 FTVVGVLKRTGTPVDRTLHISLGGMEAIHIDW-------HNGVPARGAGRISAEQARTMD 235
           + VVG L  +GTP DR + + +  +  +H  W       H      GA     + A   D
Sbjct: 169 YRVVGRLAASGTPWDRAVLVPIEAVWRVHGHWAPDHDHEHEEEHGHGADEHDHDHAGESD 228

Query: 236 ----LQPAAI--------TAFMLGLNSKIATFSLQREINEYRSEPLLAILPGVALQELWS 283
               L+P AI         A ++        + L++   EYR+ P +A+ P   L  L+ 
Sbjct: 229 LDDPLRPEAIFDALAPGVPAILVKPRGIAEAYKLRQ---EYRAAPTMAVFPAEVLTRLYG 285

Query: 284 LMGTAEQALFVVSLFVVLTGLIGMLTAILTSLNERRREMAILRSVGARPWHIAGLLVLEA 343
            MG A + L +V+          +L  I   + +RRR++  LR+ GA    I  L+ +EA
Sbjct: 286 TMGDARRILAMVAAGAQALVGAAILLVITVEVLQRRRQIGALRAFGAPRRAIFALVWVEA 345

Query: 344 LSLASVGIVAGLGLLYAG-IALAQGYVQANYGLYLPLALPSTHEWTLLAIILGAALLMGS 402
            +L   G++ G  L Y G +ALA+G ++   G+ LP+      +     I+LG   L   
Sbjct: 346 FALLLAGLLGGFALGYGGSLALARG-LERTGGIDLPVVF-EAGDAVYGLILLGVGALFAL 403

Query: 403 VPAWRAYRQS 412
           +PA  AYRQS
Sbjct: 404 LPAALAYRQS 413