Pairwise Alignments

Query, 227 a.a., Outer membrane protein OprG from Pseudomonas putida KT2440

Subject, 217 a.a., outer membrane protein W from Vibrio cholerae E7946 ATCC 55056

 Score =  192 bits (489), Expect = 3e-54
 Identities = 102/229 (44%), Positives = 140/229 (61%), Gaps = 14/229 (6%)

Query: 1   MNKSLLGASLVALALAAPAAHAYQAGDMILRAGAITTAPNESSGDLKFDGNKVSGTKATL 60
           M +++ G +++A   +AP   A+Q GD I+RAG  +  PN+SS       +KV  T++ L
Sbjct: 1   MKQTICGLAVLAALSSAPV-FAHQEGDFIVRAGIASVVPNDSS-------DKVLNTQSEL 52

Query: 61  --DSDTQLGLTFAYMLTDHIGLELLAATPFKHTVGVKGLGGGLDGKLADIKQLPPTLSLQ 118
             +S+TQLGLT  YM TD+I  E+LAATPF H +   G   G  G + + K LPPT  +Q
Sbjct: 53  AVNSNTQLGLTLGYMFTDNISFEVLAATPFSHKISTSGGELGSLGDIGETKHLPPTFMVQ 112

Query: 119 YYPMEPNSRFQPYAGVGINYTLFFDEDLSSARKEQGFSNLKLQDSVGIAGQLGMDYMLTD 178
           YY  E NS F+PY G G+NYT FFDE  +      G S+LKL DS G+A  +G DYML D
Sbjct: 113 YYFGEANSTFRPYVGAGLNYTTFFDESFNGTGTNAGLSDLKLDDSWGLAANVGFDYMLND 172

Query: 179 NLLVNASVWYVDIDTKASVNGPTALGYSKTKVDVDVDPWVYMVGLGYKF 227
           +  +NASVWY +I+T A+       G      DV+++PWV+M+  GYKF
Sbjct: 173 SWFLNASVWYANIETTATYKA----GADAKSTDVEINPWVFMIAGGYKF 217