Pairwise Alignments

Query, 227 a.a., Outer membrane protein OprG from Pseudomonas putida KT2440

Subject, 213 a.a., outer membrane protein W (RefSeq) from Shewanella loihica PV-4

 Score =  191 bits (486), Expect = 7e-54
 Identities = 105/229 (45%), Positives = 144/229 (62%), Gaps = 18/229 (7%)

Query: 1   MNKSLLGASLVALALAAP--AAHAYQAGDMILRAGAITTAPNESSGDLKFDGNKVSGTKA 58
           M K  + + L+A AL +   AA A+QAGD+I+RAG +  APNESS D+   G      + 
Sbjct: 1   MMKKTIVSGLIAAALLSTGFAASAHQAGDIIVRAGGVVVAPNESSEDVAGFG------EF 54

Query: 59  TLDSDTQLGLTFAYMLTDHIGLELLAATPFKHTVGVKGLGGGLDGKLADIKQLPPTLSLQ 118
            + S+TQLGL F YMLTD+IG+ELLAATPF H V +KG+     GK+A+ K LPPTL  Q
Sbjct: 55  NISSNTQLGLNFGYMLTDNIGIELLAATPFSHDVSLKGV-----GKIAETKHLPPTLVAQ 109

Query: 119 YYPMEPNSRFQPYAGVGINYTLFFDEDLSSARKEQGFSNLKLQDSVGIAGQLGMDYMLTD 178
           YY    +S+ +PY G G+N+T FFD + ++   +   ++L L +S G+A Q G+DY +  
Sbjct: 110 YYFGSADSKLRPYIGAGVNFTNFFDSEFTN-DLDGALTDLSLSNSWGLAAQAGIDYQVNK 168

Query: 179 NLLVNASVWYVDIDTKASVNGPTALGYSKTKVDVDVDPWVYMVGLGYKF 227
           N LVNASVWY  I+T  +      L      ++ D+DPWVYMV +GY F
Sbjct: 169 NWLVNASVWYAKINTDVNFK----LAGQAVSIETDIDPWVYMVSVGYTF 213