Pairwise Alignments

Query, 316 a.a., formate dehydrogenase-O, beta subunit from Pseudomonas putida KT2440

Subject, 189 a.a., formate dehydrogenase, iron-sulfur subunit (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 90.1 bits (222), Expect = 4e-23
 Identities = 57/191 (29%), Positives = 79/191 (41%), Gaps = 41/191 (21%)

Query: 28  LIDTTKCIGCKACQVACSEWNELRDEVGHNHGTYDNPQDLTAETWTLMRFTEHERDDGNL 87
           L DT +CI C  C  AC   N+                  +A  W + R      +DG  
Sbjct: 7   LCDTKRCIECNGCVTACKNEND------------------SALEWGIQRRRVVTINDGKP 48

Query: 88  EWLIRKDGCMHCADPGCLKACPSPGAIIKHANGIVDFNQDHCIGCGYCITGCPFNIPRIS 147
                   CMHC+D  C+  CP+     K  +GIV  ++D CIGCGYC+  CPF  P+  
Sbjct: 49  GEASISVACMHCSDAPCMAVCPA-NCFYKTEDGIVLHDKDTCIGCGYCLYACPFGAPQFP 107

Query: 148 QKD-----HKAYKCTLC-----------------SDRVSVGLEPACVKTCPTGAIVFGSK 185
           QK       K  KCT C                 S+R++ G  P C + C T A++ G  
Sbjct: 108 QKGAFGNRGKMDKCTFCAGGPEETHSEAERQKYGSNRIAEGKLPMCAELCATKALLAGDA 167

Query: 186 DEMKVHAAERI 196
           + +     ER+
Sbjct: 168 EVVSNIFRERV 178



 Score = 23.1 bits (48), Expect = 0.005
 Identities = 10/22 (45%), Positives = 11/22 (50%)

Query: 23 EEVAKLIDTTKCIGCKACQVAC 44
          E+   L D   CIGC  C  AC
Sbjct: 78 EDGIVLHDKDTCIGCGYCLYAC 99