Pairwise Alignments

Query, 265 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

Subject, 269 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

 Score =  144 bits (364), Expect = 1e-39
 Identities = 96/269 (35%), Positives = 139/269 (51%), Gaps = 22/269 (8%)

Query: 5   MEMLGSYWA-------EHWLLAVLILGAIAFVAGFVDSIAGGGGLFLVPGFLLVGMPPQV 57
           M  L SY++       E  L    +L  +A VAGF+DSIAGGGGL  +P  +  G+PP V
Sbjct: 1   MRSLSSYYSIITIMEFELTLQIAALLFGVAMVAGFIDSIAGGGGLLTIPALMWAGLPPAV 60

Query: 58  ALGQEKLVSTLGTLAAIRNFLANSKMVWQVALVGVPFSLLGAYLGAHLIVSISQETVGKI 117
           ALG  KL +  G+  A   F+        V L  V  SL+ A+ GA L   + Q    K+
Sbjct: 61  ALGTNKLQACGGSFFASLYFVRKGL----VDLKAVKLSLICAFAGAALGTILVQLVDAKV 116

Query: 118 ILALIPLGILI----FLTPKDRPVEERE---LSSRMLFTVVPLTCLAIGFYDGFFGPGTG 170
           +  ++P  IL     FL  K    ++R      +   FT      L +G YDGFFGPGTG
Sbjct: 117 LELVLPFLILAIGCYFLFSKKISEDDRHQVLTPTAFAFTAA----LGVGLYDGFFGPGTG 172

Query: 171 SMFIIAFHYLLRMDLVSSSANSKTFNFASNIGALVAFVSAGKVVYLLALPLVACNILGNH 230
           S F +AF  L    L  ++A++K  NF++NI +L+ F   GKV+++L L ++A   +G  
Sbjct: 173 SFFALAFVTLAGFGLAKATAHAKVLNFSTNIASLIFFTLGGKVIWVLGLVMLAGQAIGAT 232

Query: 231 LGSSLALRKGNDVVRKALVFSMLCLFTSL 259
           LGS L + KG  +++  +V   L +   L
Sbjct: 233 LGSRLVVTKGTKIIKPLVVTMSLAMSVKL 261