Pairwise Alignments

Query, 464 a.a., transporter of an unknown substrate from Pseudomonas putida KT2440

Subject, 487 a.a., Putative transport protein from Pseudomonas fluorescens FW300-N2E2

 Score = 76.6 bits (187), Expect = 2e-18
 Identities = 54/177 (30%), Positives = 84/177 (47%), Gaps = 3/177 (1%)

Query: 16  AAGGLALVFAFRMLGMFMVLPVLATYGMDLAGATPALIGLAIGAYGLTQAVLQIPFGMIS 75
           A   LAL      LG  +    L T    L GA+   +   + AY L    L +  G + 
Sbjct: 25  ALASLALSTLLASLGASVAAVALPTLAEAL-GASFQQVQWVVLAYLLAITTLIVSVGRLG 83

Query: 76  DRIGRRPVIYLGLVIFALGSVLAAQADSIWGVIAGRILQGAGA--ISAAVMALLSDLTRE 133
           D +GRR ++  G+ +F L S +   A S+W ++AGR LQG GA  + A  +AL+ +   +
Sbjct: 84  DLMGRRKLLLAGIALFTLASAVCGLAPSLWLLVAGRALQGLGAAIMMALTLALVGETVDQ 143

Query: 134 QHRTKAMAMIGMSIGLSFAVAMVVGPLLTSAFGLSGLFLVTAGLALVGILLIAFVVP 190
           +    AM ++     +  A+    G +L S FG   LFLV   L L+ + L  + +P
Sbjct: 144 EKTGSAMGLLATLSAVGTALGPSFGGMLISGFGWPALFLVNIPLGLLTLGLAWYSLP 200



 Score = 40.8 bits (94), Expect = 1e-07
 Identities = 57/210 (27%), Positives = 81/210 (38%), Gaps = 11/210 (5%)

Query: 205 RQAIGPTLR--HPDLLRLDVSIFILHAVLMASFVALPL-AFVERGGLPKEQHWWVYLTAL 261
           R A  P  R   P      +++  L A L AS  A+ L    E  G   +Q  WV L  L
Sbjct: 10  RPATAPAHRLFSPRWALASLALSTLLASLGASVAAVALPTLAEALGASFQQVQWVVLAYL 69

Query: 262 FISFFAMVPFIIYGEKKRKMKRVLAGAVSVLLLTEIYFWEWADGLRGLVIGTVVFFTAFN 321
                 +V     G+   + K +LAG     L + +     A  L  LV G  +      
Sbjct: 70  LAITTLIVSVGRLGDLMGRRKLLLAGIALFTLASAVC--GLAPSLWLLVAGRALQGLGAA 127

Query: 322 LLEASLPSLVSKVSPAGGKGTAMGVYSTSQFLGAALGGILGGWLFQHGGLNTVF-----L 376
           ++ A   +LV +       G+AMG+ +T   +G ALG   GG L    G   +F     L
Sbjct: 128 IMMALTLALVGETVDQEKTGSAMGLLATLSAVGTALGPSFGGMLISGFGWPALFLVNIPL 187

Query: 377 GSAVLCAIWLIVALRMNEPPYVTSLRMPLT 406
           G   L   W  + +R   PP     R  +T
Sbjct: 188 GLLTLGLAWYSLPVR-EVPPKPEGTRFDVT 216



 Score = 35.0 bits (79), Expect = 6e-06
 Identities = 43/184 (23%), Positives = 78/184 (42%), Gaps = 20/184 (10%)

Query: 22  LVFAFRMLGMFMVLPVLATYGMDLAGATPA-LIGLAIGAYGLTQAVLQIPFGMISDRIGR 80
           LV +  +  + M   ++  + + +  A PA  +GLA+       A+  +P G + DR G 
Sbjct: 283 LVTSALVATVMMATLLVGPFYLSITLALPAAFVGLALAVGPSVAALAGVPAGRLVDRFGV 342

Query: 81  RPVIYLGLVIFALGSVLAAQADSIWGVI---AGRILQGAG------AISAAVMALLSDLT 131
            P+   GL    LG ++ +      G +   A  ++   G      A + AVMA ++   
Sbjct: 343 HPMRVAGLANMVLGCLMLSLVPPTLGTVGYLAAIVVTTLGYAFFQTANNTAVMADVA--- 399

Query: 132 REQHRTKAMAMIGMSIGLSFAV-AMVVGPLLTSAFGLSGL-----FLVTAGLALVGILLI 185
             Q R     ++ +S  L F   A V+G +  +A   + +       VT GL +   + +
Sbjct: 400 -AQRRGVIAGLLNLSRNLGFFTGASVLGAVFAAAAATNDITGASPAAVTNGLHMTFAVAL 458

Query: 186 AFVV 189
           A V+
Sbjct: 459 AMVI 462