Pairwise Alignments

Query, 464 a.a., transporter of an unknown substrate from Pseudomonas putida KT2440

Subject, 455 a.a., Arabinose efflux permease from Pseudomonas stutzeri RCH2

 Score =  656 bits (1693), Expect = 0.0
 Identities = 332/455 (72%), Positives = 388/455 (85%), Gaps = 1/455 (0%)

Query: 1   MHDTHNERMSGGETRAAGGLALVFAFRMLGMFMVLPVLATYGMDLAGATPALIGLAIGAY 60
           M D ++ERMS  E RAA GLALVFAFRMLGMFMVLPVLATYGMDL GATP LIGLAIGAY
Sbjct: 1   MQDPYSERMSASEKRAASGLALVFAFRMLGMFMVLPVLATYGMDLEGATPTLIGLAIGAY 60

Query: 61  GLTQAVLQIPFGMISDRIGRRPVIYLGLVIFALGSVLAAQADSIWGVIAGRILQGAGAIS 120
           GLTQA+LQIPFG++SDRIGR P+IY GL+IFA G+ LAA +DSIWGV+AGRILQGAGAIS
Sbjct: 61  GLTQALLQIPFGILSDRIGRLPIIYFGLLIFAAGAALAAMSDSIWGVVAGRILQGAGAIS 120

Query: 121 AAVMALLSDLTREQHRTKAMAMIGMSIGLSFAVAMVVGPLLTSAFGLSGLFLVTAGLALV 180
           AAVMALLSDLTREQHRTKAMA+IG+SIG SFAVAM+VGPLLT AFGLSGLF VTAG+A++
Sbjct: 121 AAVMALLSDLTREQHRTKAMALIGVSIGFSFAVAMIVGPLLTRAFGLSGLFWVTAGMAVL 180

Query: 181 GILLIAFVVPSTHSILQHRESGVARQAIGPTLRHPDLLRLDVSIFILHAVLMASFVALPL 240
           G +++A V+P   + ++HRESGVA+QA+G TLRHPDLLRLD SI  LHA+LMASFVALPL
Sbjct: 181 GGVIVA-VLPKAEAHVRHRESGVAKQALGLTLRHPDLLRLDFSILALHAILMASFVALPL 239

Query: 241 AFVERGGLPKEQHWWVYLTALFISFFAMVPFIIYGEKKRKMKRVLAGAVSVLLLTEIYFW 300
           A VE+G LPKE+HWWVYLTAL + FF M+PFIIYGEKKR+M+RVL GAV+ LL+ E++FW
Sbjct: 240 ALVEQGALPKEEHWWVYLTALLVGFFGMIPFIIYGEKKRQMRRVLLGAVTALLICELFFW 299

Query: 301 EWADGLRGLVIGTVVFFTAFNLLEASLPSLVSKVSPAGGKGTAMGVYSTSQFLGAALGGI 360
            + +GL  LV+G V FF AFNLLEASLPSL+SKV+PAGGKGTAMGVYSTSQFLGA LGG+
Sbjct: 300 WFGNGLWMLVVGMVGFFIAFNLLEASLPSLISKVAPAGGKGTAMGVYSTSQFLGAGLGGV 359

Query: 361 LGGWLFQHGGLNTVFLGSAVLCAIWLIVALRMNEPPYVTSLRMPLTPEAVREAGLTERLM 420
           LGG L+Q GGL  VF G A LCA+W +VA  M EPPYVTSLR+PL+  A+  AGL + L+
Sbjct: 360 LGGVLYQQGGLALVFAGCAALCALWFLVAFSMREPPYVTSLRLPLSTGALANAGLGDDLL 419

Query: 421 AVPGVTDAVVVEEEAAIYIKLDTKILDRATLERLV 455
            V GV+D ++V EEAA YIK+DT+ LDR  L+RLV
Sbjct: 420 QVTGVSDVLIVIEEAAAYIKVDTQQLDREALDRLV 454