Pairwise Alignments

Query, 464 a.a., transporter of an unknown substrate from Pseudomonas putida KT2440

Subject, 400 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

 Score = 70.9 bits (172), Expect = 7e-17
 Identities = 64/228 (28%), Positives = 101/228 (44%), Gaps = 3/228 (1%)

Query: 20  LALVFAFRMLGMFMVLPVLATYGMDLAGATPALIGLAIGAYGLTQAVLQIPFGMISDRIG 79
           L L+  F  L + + LP L            AL    I  +     V Q+  G ++D+ G
Sbjct: 17  LTLLVLFSPLAIDIYLPALPQISQAFH-VEHALAQDTITWFLFAMGVGQLFAGPLADKYG 75

Query: 80  RRPVIYLGLVIFALGSVLAAQADSIWGVIAGRILQGAG--AISAAVMALLSDLTREQHRT 137
           RR V   G+ I+AL ++LA  A SI  ++  R+LQG G  A S A  A + DL   Q   
Sbjct: 76  RRTVALGGISIYALSALLAWSAQSIEWMLMARLLQGLGACATSVAAFATVRDLFGPQRSG 135

Query: 138 KAMAMIGMSIGLSFAVAMVVGPLLTSAFGLSGLFLVTAGLALVGILLIAFVVPSTHSILQ 197
           K ++ +  +I    A+A ++G  LT  FG    F    G AL+  L +A  +  ++  + 
Sbjct: 136 KMISYLNGAICFIPALAPILGSWLTQQFGWRANFSFMTGFALLVGLAMALRLQESNPYMG 195

Query: 198 HRESGVARQAIGPTLRHPDLLRLDVSIFILHAVLMASFVALPLAFVER 245
            R +          L+ P  L       +  AV++A   + P+  +ER
Sbjct: 196 SRPAVFKLSRYAAVLKAPTFLFHASLCLLAMAVILAYVTSAPVILMER 243