Pairwise Alignments

Query, 464 a.a., transporter of an unknown substrate from Pseudomonas putida KT2440

Subject, 414 a.a., Major facilitator superfamily transporter MFS_1 (NCBI) from Rhodospirillum rubrum S1H

 Score = 85.1 bits (209), Expect = 4e-21
 Identities = 87/323 (26%), Positives = 151/323 (46%), Gaps = 24/323 (7%)

Query: 54  GLAIGAYG-LTQAVLQIPFGMISDRIGRRPVIYLGLVIFALGSVLAAQADSIWGVIAGRI 112
           G+ I   G LT +VL +  G + D  G R +  +GL +FA+ S+L A A ++W +I  R 
Sbjct: 54  GVVIAYLGTLTVSVLIV--GRLGDLHGLRRMHLVGLGLFAVASLLCALAPTLWLLIGARA 111

Query: 113 LQGAGA--ISAAVMALLSDLTREQHRTKAMAMIGMSIGLSFAVAMVVGPLLTSAFGLSGL 170
           LQG GA  + +  MAL+ + T  +   +AM ++G    L  A+   +G  L SA G  G+
Sbjct: 112 LQGLGAAFLMSLSMALMRETTSPERMGRAMGLLGTMSALGTALGPSLGGALLSASGWRGI 171

Query: 171 FLVTAGLALVGILLIAFVVPSTHSILQHRESGVARQAIGPTLRHPDLLRLDVSIFILHAV 230
           FLV   LA++ ++L    +PS       +ESG   + +   ++   L  L +++ +  AV
Sbjct: 172 FLVQCPLAVLALILAFVSLPSPAG----KESGPPTR-VRAMVKVAMLPALLINLLVA-AV 225

Query: 231 LMASFVALPLAFVERGGLPKEQHWWVYLTALFISFFAMVP----FIIYGEKK---RKMKR 283
           +M + V  P       GL +     V      ++  + +P       +G ++     +  
Sbjct: 226 MMTTLVVGPFYLGRGLGLAETAVGLVMAVGPALAIVSGLPSGRLVDAWGARRVVGIGLAM 285

Query: 284 VLAGAVSVLLLTEIYFWEWADGLRGLVIGTVVFFTAFNLLEASLPSLVSKVSPAGGKGTA 343
           + AGA  + +L        + G+ G V+  +V    + L +A+  +     SP  G+G  
Sbjct: 286 LAAGAFLLSVLPN------SLGVGGYVLAILVLTPGYQLFQAANNTATLADSPKEGRGVV 339

Query: 344 MGVYSTSQFLGAALGGILGGWLF 366
            G+   S+ +G  LG  + G LF
Sbjct: 340 SGLLGLSRNIGLILGASVMGALF 362



 Score = 39.3 bits (90), Expect = 2e-07
 Identities = 60/202 (29%), Positives = 85/202 (42%), Gaps = 31/202 (15%)

Query: 22  LVFAFRMLGMFMVLPVLATYGMDLAGATPALIGLAIGAYGLTQAVLQIPFGMISDRIGRR 81
           L+ A  M+   +V P     G+ LA      +GL +        V  +P G + D  G R
Sbjct: 220 LLVAAVMMTTLVVGPFYLGRGLGLAETA---VGLVMAVGPALAIVSGLPSGRLVDAWGAR 276

Query: 82  PVIYLGLVIFALGSVLAAQADSIWGVIAGRIL------QGAGAISAA-VMALLSDLTREQ 134
            V+ +GL + A G+ L +   +  GV  G +L       G     AA   A L+D  +E 
Sbjct: 277 RVVGIGLAMLAAGAFLLSVLPNSLGV-GGYVLAILVLTPGYQLFQAANNTATLADSPKE- 334

Query: 135 HRTKAMAMIGMS--IGLSFAVAMVVGPL---------------LTSAFGLSGLFLVTAGL 177
            R     ++G+S  IGL    A V+G L               L  A G+   FLV AGL
Sbjct: 335 GRGVVSGLLGLSRNIGLILG-ASVMGALFAFAVGSEDVGRASALAIAKGMQLTFLVAAGL 393

Query: 178 ALVGILLIAFVVPSTHSILQHR 199
            +VG L IA++    H   Q R
Sbjct: 394 -MVGGLWIAWLTARRHGEAQGR 414



 Score = 37.0 bits (84), Expect = 1e-06
 Identities = 25/68 (36%), Positives = 32/68 (47%), Gaps = 1/68 (1%)

Query: 322 LLEASLPSLVSKVSPAGGKGTAMGVYSTSQFLGAALGGILGGWLFQHGGLNTVFLGSAVL 381
           L+  S+  +    SP    G AMG+  T   LG ALG  LGG L    G   +FL    L
Sbjct: 120 LMSLSMALMRETTSPER-MGRAMGLLGTMSALGTALGPSLGGALLSASGWRGIFLVQCPL 178

Query: 382 CAIWLIVA 389
             + LI+A
Sbjct: 179 AVLALILA 186