Pairwise Alignments

Query, 464 a.a., transporter of an unknown substrate from Pseudomonas putida KT2440

Subject, 404 a.a., putative tetracycline resistance protein, class C from Phaeobacter inhibens DSM 17395

 Score = 76.6 bits (187), Expect = 1e-18
 Identities = 47/169 (27%), Positives = 83/169 (49%), Gaps = 6/169 (3%)

Query: 29  LGMFMVLPVLATYGMDLAGATPA----LIGLAIGAYGLTQAVLQIPFGMISDRIGRRPVI 84
           +G+ +V P++    + +   + A      G+ + AY     +     G +SD  GRRPV+
Sbjct: 19  IGVGIVFPIMPDLMLRVGAQSTAEGALWSGIMMSAYAAAMFLFGPIVGSLSDSYGRRPVL 78

Query: 85  YLGLVIFALGSVLAAQADSIWGVIAGRILQG-AGAISAAVMALLSDLTREQHRTKAMAMI 143
            L LV   +  V+ A A + W ++ GR++ G AGA      A +SD+ +   R  A  MI
Sbjct: 79  ILALVTLTIDYVIMALAQTYWMLLIGRVIAGMAGATYITATAYISDIAKPTERGAAFGMI 138

Query: 144 GMSIGLSFAVAMVVGPLLTSAFGLSGLFLVTAGLALVGILLIAFVVPST 192
           G + G+ F +   +G  L S   +S  F + AGL+ + ++    ++P +
Sbjct: 139 GAAFGIGFVLGPALGG-LASGLHISAPFWIAAGLSALNVVFGIVILPES 186



 Score = 37.0 bits (84), Expect = 1e-06
 Identities = 41/174 (23%), Positives = 75/174 (43%), Gaps = 12/174 (6%)

Query: 20  LALVFAFRMLGMFMVLPVLATY-GMDLAGATPALIGLAIGAYGLTQAVLQIP-FGMISDR 77
           L  +F F    +  V P L ++ G ++ G     IG+ + AYG+  AV+Q      ++ R
Sbjct: 219 LICIFVFEFANL--VYPTLWSFWGREVFGWDGFTIGVTLSAYGVLIAVVQAGILPQMTKR 276

Query: 78  IGRRPVIYLGLVIFALGSVLAAQADSIWGVIAGRILQGAGAISAAVMALLSDLTREQHRT 137
           +G    + + +V   +  +    A +IW V+   +     A+S     L++     +   
Sbjct: 277 LGDYKTLIIAMVAAVIAMIGFGLASAIWVVV---VFLPIAALSDMAPPLITAFAANRVGE 333

Query: 138 KAMAMIGMSIGLSFAVAMVVGPL-LTSAF----GLSGLFLVTAGLALVGILLIA 186
               ++   I    +VA VV PL LT  F    G +  +L  A   +  +L++A
Sbjct: 334 DQQGVVQGVIASLSSVAAVVAPLVLTGVFERFVGEAEWYLPGAPFLVAAVLVLA 387