Pairwise Alignments

Query, 464 a.a., transporter of an unknown substrate from Pseudomonas putida KT2440

Subject, 455 a.a., transporter, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  388 bits (996), Expect = e-112
 Identities = 210/438 (47%), Positives = 291/438 (66%), Gaps = 2/438 (0%)

Query: 6   NERMSGGETRAAGGLALVFAFRMLGMFMVLPVLATYGMDLAGATPALIGLAIGAYGLTQA 65
           N  +SG E + A  LA VF  RM+G+FM++PV A YG  L G +P  +G+AIGAYGLTQA
Sbjct: 3   NNGLSGTEKKVAFSLASVFGLRMMGLFMIMPVFALYGQHLEGFSPLWVGIAIGAYGLTQA 62

Query: 66  VLQIPFGMISDRIGRRPVIYLGLVIFALGSVLAAQADSIWGVIAGRILQGAGAISAAVMA 125
           VLQIP G++SD+ GR+PVI  GLV+FA+GSV+AA A++I+GV+ GR +QG GAI+AAV+A
Sbjct: 63  VLQIPMGILSDKYGRKPVILAGLVVFAIGSVIAANAETIYGVVFGRAVQGMGAIAAAVLA 122

Query: 126 LLSDLTREQHRTKAMAMIGMSIGLSFAVAMVVGPLLTSAFGLSGLFLVTAGLALVGILLI 185
           L +DLTR++ RTK MA+IGM IGLSFA+++++GP++    GL+GLF +TA LA++G+LLI
Sbjct: 123 LAADLTRDEQRTKVMAIIGMCIGLSFALSLLMGPIVAQHLGLTGLFWLTALLAILGMLLI 182

Query: 186 AFVVPSTHSILQHRESGVARQAIGPTLRHPDLLRLDVSIFILHAVLMASFVALPLAFVER 245
            F+VP+  +     ++      +      P L RL+  IFILH VL A FVALPL  V+ 
Sbjct: 183 QFLVPNPITQAPKGDTLATPAKLKRMFFEPQLFRLNAGIFILHLVLTAVFVALPLDLVD- 241

Query: 246 GGLPKEQHWWVYLTALFISFFAMVPFIIYGEKKRKMKRVLAGAVSVLLLTEIYFWEWADG 305
            GL KE+HW +Y  A   +FF MVP II G K++  K +   A+ +++        +A  
Sbjct: 242 AGLVKEKHWMLYFPAFVGAFFLMVPLIIIGVKRKNTKAMFQIALVIMMFALAAMAIFASN 301

Query: 306 LRGLVIGTVVFFTAFNLLEASLPSLVSKVSPAGGKGTAMGVYSTSQFLGAALGGILGGWL 365
           L  L +  ++FFT FN LEASLPSL++K  P G KG+AMGVYSTSQFLGA  GG+LGG  
Sbjct: 302 LWVLSVAVLLFFTGFNYLEASLPSLIAKFCPVGEKGSAMGVYSTSQFLGAFCGGMLGGGA 361

Query: 366 FQHGGLNTVFLGSAVLCAIWLIVALRMNEPPYVTSLRMPLTPEAVREA-GLTERLMAVPG 424
           FQ  G   VF+ + VL  IWL++ L M  P  + S  +    +   +A  +  +L  + G
Sbjct: 362 FQLVGAVGVFIVALVLMGIWLLLTLGMKNPVLLKSYTLEAAVKDKNQARDMAAQLSQLMG 421

Query: 425 VTDAVVVEEEAAIYIKLD 442
           V +A+VV +E   Y+K+D
Sbjct: 422 VVEAIVVLDEKVAYLKVD 439