Pairwise Alignments

Query, 464 a.a., transporter of an unknown substrate from Pseudomonas putida KT2440

Subject, 396 a.a., transporter, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 72.4 bits (176), Expect = 3e-17
 Identities = 51/178 (28%), Positives = 84/178 (47%), Gaps = 6/178 (3%)

Query: 19  GLALVFAFRMLGMFMVLPVLATYGMDLAGATPALIGLAIGAYGLTQAVLQIPFGMISDRI 78
           GL L++   +    + LP +A+      GA+ A + +A   Y    A   +  G ++DRI
Sbjct: 10  GLVLMYPTGIDMYLVGLPQIASQ----LGASEAQLHIAFSVYLAGMATTMLFAGSLADRI 65

Query: 79  GRRPVIYLGLVIFALGSVLAAQADSIWGVIAGRILQ--GAGAISAAVMALLSDLTREQHR 136
           GR+P+   G ++FAL S  AA + +    +  R  Q  GAG       A+L D+  ++ R
Sbjct: 66  GRKPITLFGALLFALASYFAAGSQTSDLFLIARFAQGIGAGCCYVVAFAILRDVLDDKRR 125

Query: 137 TKAMAMIGMSIGLSFAVAMVVGPLLTSAFGLSGLFLVTAGLALVGILLIAFVVPSTHS 194
            K ++M+     +   +A V+G L+   F    LF   A + L+   L   V+  THS
Sbjct: 126 AKVLSMVNGVTCIIPVIAPVIGHLIMLKFPWPSLFYTMAAMGLLVFALCLLVLRETHS 183