Pairwise Alignments

Query, 464 a.a., transporter of an unknown substrate from Pseudomonas putida KT2440

Subject, 396 a.a., multidrug efflux system protein MdtL (RefSeq) from Shewanella sp. ANA-3

 Score = 74.7 bits (182), Expect = 5e-18
 Identities = 73/288 (25%), Positives = 128/288 (44%), Gaps = 15/288 (5%)

Query: 19  GLALVFAFRMLGMFMVLPVLATYGMDLAGATPALIGLAIGAYGLTQAVLQIPFGMISDRI 78
           GL L++   +    + LP +A       GAT A + +A   Y    A   +  G ++DRI
Sbjct: 10  GLVLMYPTGIDMYLVGLPQIANQ----LGATEAQLHIAFSVYLAGMATTMLFAGSLADRI 65

Query: 79  GRRPVIYLGLVIFALGSVLAAQADSIWGVIAGRILQGAGAISAAVM--ALLSDLTREQHR 136
           GR+P+     ++FAL S  AA++ S    +  R +QG GA    V+  A+L D   ++ R
Sbjct: 66  GRKPITLFSALLFALASYFAARSQSSDLFLVARFVQGVGAGCCYVVAFAILRDALDDKRR 125

Query: 137 TKAMAMIGMSIGLSFAVAMVVGPLLTSAFGLSGLFLVTAGLALVGILLIAFVVPSTHSIL 196
            K ++M+     +   +A V+G L+   F    LF   A + L+   L  FV+  T+S  
Sbjct: 126 AKVLSMVNGVTCIIPVIAPVIGHLIMLRFPWPSLFYTMAVMGLLVFGLCLFVLRETYSKA 185

Query: 197 QHRESGVARQAIGPTLRHPDLLRLDVSIFILHAVLMASFVAL-PLAFVERGGLPKEQHWW 255
                 + R       +   + R  V I  L    + S+V + P+  + + G  + Q+  
Sbjct: 186 SFHSQTLPRVQTESFKQGFFISR--VVITTLGVTTILSYVNVSPMLIMGQMGFDRGQYSN 243

Query: 256 VYLTALFISFFA--MVPFIIYGEKKRKM----KRVLAGAVSVLLLTEI 297
                  +S  A    PF++   K++ +    + + A A  V +LT++
Sbjct: 244 TMAMTALVSMLASFSTPFLLNQFKEKSLILFSQTLFAAAALVFILTQL 291