Pairwise Alignments

Query, 464 a.a., transporter of an unknown substrate from Pseudomonas putida KT2440

Subject, 414 a.a., multidrug resistance protein D (RefSeq) from Shewanella sp. ANA-3

 Score = 76.6 bits (187), Expect = 1e-18
 Identities = 104/401 (25%), Positives = 180/401 (44%), Gaps = 43/401 (10%)

Query: 10  SGGETRAAGGLALVFAFRMLGMFMVLPVLATYGMDLA---GATPALIGLAIGAYGLTQAV 66
           +G  T+    L  + A   +   + +P L      LA       A++   + AYGL Q +
Sbjct: 19  AGSATQLLFMLVFMVACGQMAQTIFVPALPLIAQGLAVDASKLQAVMACYLLAYGLCQFI 78

Query: 67  LQIPFGMISDRIGRRPVIYLGLVIFALGSVLAAQADSIWGVIAGRILQGAGAISAAVMAL 126
               +G +SDR+GR+  + +G+ IF LG+++AA+A S   +I   +LQG G  SA   AL
Sbjct: 79  ----YGPLSDRVGRKMPLLIGIGIFILGALMAAEATSFNQLIFASLLQGLGTASAG--AL 132

Query: 127 LSDLTREQH----RTKAMAMIGMSIGLSFAVAMVVGPLLTSAFGLSGLFLVTAGLALVGI 182
              + R+ +      +  + + M++     VA  +G   ++ +G+  ++ V  G   +  
Sbjct: 133 CRSIPRDHYFGDNLVRFNSYVSMAVVFLPLVAPFLGSFASAYWGVQAVYWVLFGFGSLVW 192

Query: 183 LLIAFVVPSTHSILQHRESGVARQAIGPTLRHPDLLRLDVSIFILHAVLMASFVALPLAF 242
           LL+ F      S+ +H+     +Q I  + RH  L       ++L   L+A+F  +  AF
Sbjct: 193 LLLCF--GFKESLPKHKRE---QQPILASYRHV-LRHRSFRAYLLS--LIATFAGI-AAF 243

Query: 243 VERGGLPKEQHWWVYLTALFISFFAMVPF-------IIYGEKKRKMKRVLAGAVSVLLLT 295
               G+   Q  ++ L+   +S + + P        +I G +K+  + VL G   V LL 
Sbjct: 244 EAIAGVLYGQ--YLQLSPFMVSCYFVAPIPGYLLGALIAGRQKQAQRTVLQG---VALLG 298

Query: 296 EIYFWEWADGLRGLV------IGTVVFFTAFNLLEASLPSLVSKVSPAGGKGTAMGVYST 349
               +    G+  LV      IG+++FF+   +L  +L S   +  P    G A  +   
Sbjct: 299 AGALFMLIPGIFQLVVGWSLLIGSILFFSGAGMLFPTLTSAALEPFPRQA-GIAGALLGG 357

Query: 350 SQFLGAALGGILGGWLFQHGGLNTVFLGSAVLCAIWLIVAL 390
            Q  GA L  +    L   GG  ++ L SA L  + +IVAL
Sbjct: 358 LQNFGAGLAALTMS-LVPMGGQLSIGLLSA-LMVLLVIVAL 396