Pairwise Alignments

Query, 443 a.a., Sec Translocation Complex - SecY subunit from Pseudomonas putida KT2440

Subject, 444 a.a., protein translocase subunit SecY from Vibrio cholerae E7946 ATCC 55056

 Score =  580 bits (1496), Expect = e-170
 Identities = 285/431 (66%), Positives = 360/431 (83%), Gaps = 5/431 (1%)

Query: 12  KGGMSELWARLRFLFMAIIVYRIGAHIPVPGINPDRLADLFRQNEGTILSLFNMFSGGAL 71
           + G+SEL +RL F+  A++V+R G+ +P+PGI+   LA+LF Q +GTI+ +FNMFSGGAL
Sbjct: 13  QSGLSELKSRLFFVIGALLVFRAGSFVPIPGIDAAVLAELFEQQKGTIVEMFNMFSGGAL 72

Query: 72  ERMSIFALGIMPYISASIIMQLMTAVSPQLEQLKKEGEAGRRKISQYTRYGTVILALVQA 131
           ER SI ALGIMPYISASI++QL+T V P L +LKKEGEAGRRKISQYTRYGT++LA  QA
Sbjct: 73  ERASILALGIMPYISASIVVQLLTVVHPALAELKKEGEAGRRKISQYTRYGTLVLATFQA 132

Query: 132 IGMSIGLANQ--GVAFSVGLGFHIVAVSTFVAGAMFMMWLGEQITERGVGNGISMLIFAG 189
           IG++ GL N    +       F ++A  + V G MF+MWLGEQITERG+GNGIS+LIFAG
Sbjct: 133 IGIATGLPNMVNNLVVIDQTMFTLIATVSLVTGTMFLMWLGEQITERGIGNGISILIFAG 192

Query: 190 IVAGLPRAIGQSFESARTGDINIFALVAIGLLAVAIIGFVVFIERGQRRIAVHYAKRQQG 249
           IVAGLP+AIGQ+ E AR G++++  L+ I +LA A+I FVVF+ERGQRRI V+YAKRQQG
Sbjct: 193 IVAGLPKAIGQTIEQARQGELHVLLLLLIAVLAFAVIYFVVFMERGQRRIVVNYAKRQQG 252

Query: 250 RKVFAAQTSHLPLKVNMAGVIPAIFASSILLFPASLGAWFGQ---SEGMGWLQDISQSIA 306
           RKVFAAQ++HLPLK+NMAGVIPAIFASSI+LFP +L  WFGQ   S   GWL D+S +++
Sbjct: 253 RKVFAAQSTHLPLKINMAGVIPAIFASSIILFPGTLAQWFGQNGESSTFGWLTDVSLALS 312

Query: 307 PGQPLNILLFSAGIIFFCFFYTALMFNPKDVAENLKKSGAFIPGIRPGEQSARYIDGVLT 366
           PGQPL ++L++A IIFFCFFYTAL+FNP++ A+NLKKSGAF+PGIRPGEQ+A+YID V+T
Sbjct: 313 PGQPLYVMLYAAAIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPGEQTAKYIDKVMT 372

Query: 367 RLTMFGALYMMAVCLLPQFLVVAANVPFYLGGTSLLIVVVVVMDFMSQVQSHLVSHQYES 426
           RLT+ GALY+  +CL+P+F++VA NV FY GGTSLLIVVVV+MDFM+QVQ+HL+SHQYES
Sbjct: 373 RLTLAGALYITFICLIPEFMMVAWNVRFYFGGTSLLIVVVVIMDFMAQVQTHLMSHQYES 432

Query: 427 LMKKANLKGYG 437
           ++KKANLKGYG
Sbjct: 433 VLKKANLKGYG 443