Pairwise Alignments

Query, 443 a.a., Sec Translocation Complex - SecY subunit from Pseudomonas putida KT2440

Subject, 439 a.a., preprotein translocase subunit SecY from Synechococcus elongatus PCC 7942

 Score =  310 bits (795), Expect = 4e-89
 Identities = 182/422 (43%), Positives = 277/422 (65%), Gaps = 13/422 (3%)

Query: 16  SELWARLRFLFMAIIVYRIGAHIPVPGINPDRLA---DLF-RQNEGTILSLFNMFSGGAL 71
           S L  R+      +I+ R+G  IPVPGI  DR+A   DL    N G ++   ++FSGG L
Sbjct: 22  SGLRGRILITVGLLILCRLGIFIPVPGI--DRVAFSNDLQGNANLGGVIGFLDIFSGGGL 79

Query: 72  ERMSIFALGIMPYISASIIMQLMTAVSPQLEQLKK-EGEAGRRKISQYTRYGTVILALVQ 130
             + +FALGI+PYI+ASII+QL+TA  P LE L+K EGEAGRRKI+Q TRY ++  AL+Q
Sbjct: 80  SALGVFALGILPYINASIILQLLTAAVPALEDLQKNEGEAGRRKIAQLTRYVSLGWALLQ 139

Query: 131 AIGMSIGLANQGVAFSVGLGFHIVAVSTFVAGAMFMMWLGEQITERGVGNGISMLIFAGI 190
           +I +++ +    V  + G  F I      VAG+MF+MW+ E ITERG+GNG S+LIF  I
Sbjct: 140 SIVIAVWVTRYAV--TPGPLFTIQTALALVAGSMFVMWISELITERGIGNGASLLIFLNI 197

Query: 191 VAGLPRAIGQSFESARTGDIN-IFALVAIGLLAVAIIGFVVFIERGQRRIAVHYAKRQQG 249
           VA LPR++ Q+ E A++GD + +  +V + ++ +A I  +VF++ G RRI V  A+RQ G
Sbjct: 198 VATLPRSLQQTLELAQSGDRSTVGGIVILLIVFLATIVGIVFVQEGTRRIPVVSARRQVG 257

Query: 250 RKVFAAQTSHLPLKVNMAGVIPAIFASSILLFPASLGAWFGQSEGMGWLQDISQSIAPGQ 309
            +V++ ++S+LPL++N  GV+P IFAS+IL+ P SL A F  +E +  + +      P  
Sbjct: 258 NRVYSERSSYLPLRLNQGGVMPIIFASAILVLPFSL-ANFTSNEVVLRIANYLSPNGPTP 316

Query: 310 PLNILLFSAGIIFFCFFYTALMFNPKDVAENLKKSGAFIPGIRPGEQSARYIDGVLTRLT 369
            +  L +   I+ F +FY++L+ NP D+A+NLKK G+ IPG+RPG  +++Y+ GVL RLT
Sbjct: 317 WIYALFYLVLIVAFSYFYSSLILNPVDLAQNLKKMGSSIPGVRPGRATSQYVQGVLNRLT 376

Query: 370 MFGALYMMAVCLLPQFLVVAANVPFY--LGGTSLLIVVVVVMDFMSQVQSHLVSHQYESL 427
           + GA+++  V ++P  +  A  +  +   G TSLLI+V V +D   QVQ++++S +YE +
Sbjct: 377 ILGAVFLGLVAIIPTAVEGATRIRTFQGFGATSLLILVGVAIDTAKQVQTYVISQRYEGM 436

Query: 428 MK 429
           +K
Sbjct: 437 VK 438