Pairwise Alignments

Query, 443 a.a., Sec Translocation Complex - SecY subunit from Pseudomonas putida KT2440

Subject, 454 a.a., preprotein translocase SecY from Phaeobacter inhibens DSM 17395

 Score =  426 bits (1095), Expect = e-124
 Identities = 224/439 (51%), Positives = 305/439 (69%), Gaps = 9/439 (2%)

Query: 1   MAKQGALSSLGKGGMSELWARLRFLFMAIIVYRIGAHIPVPGINPDRLADLFRQNEGTIL 60
           MA   + ++LGK   ++L  R+ F    +IVYR+G +IPVPGI+ D L          I 
Sbjct: 8   MAANTSWAALGKA--TDLRNRILFTLGLLIVYRLGTYIPVPGIDADALRQFMTSAGQGIG 65

Query: 61  SLFNMFSGGALERMSIFALGIMPYISASIIMQLMTAVSPQLEQLKKEGEAGRRKISQYTR 120
            + +MF+GGAL RM IFALGIMPYISASII+QL+T++ P LEQLKKEGE GR+KI+QYTR
Sbjct: 66  GMVSMFTGGALGRMGIFALGIMPYISASIIVQLLTSMVPALEQLKKEGEQGRKKINQYTR 125

Query: 121 YGTVILALVQAIGMSIGLANQGVAFSVGLGFHIVAVSTFVAGAMFMMWLGEQITERGVGN 180
           YGTV+LA  QA G+++ L +  +A   G+ F +  + T V G MF+MWLGEQIT+RG+GN
Sbjct: 126 YGTVLLATAQAYGLAVSLESGDLATDPGMYFRLACMITLVGGTMFLMWLGEQITQRGIGN 185

Query: 181 GISMLIFAGIVAGLPRAIGQSFESARTGDINIFALVAIGLLAVAIIGFVVFIERGQRRIA 240
           GIS++IF GI+A +P AI Q   S R+G I+   ++A+ L+ +AII FVVF+ER  R+I 
Sbjct: 186 GISLIIFVGIIAEVPAAIAQFLASGRSGAISPAVIIAVILMMIAIIMFVVFMERALRKIH 245

Query: 241 VHYAKRQQGRKVFAAQTSHLPLKVNMAGVIPAIFASSILLFPASLGAW-FGQSEG--MGW 297
           + Y +RQ G KV+   +SHLP+KVN AGVIPAIFASS+LL P ++  +  G + G  M W
Sbjct: 246 IQYPRRQVGMKVYDGGSSHLPVKVNPAGVIPAIFASSLLLLPVTISTFSAGSTSGPIMSW 305

Query: 298 LQDISQSIAPGQPLNILLFSAGIIFFCFFYT-ALMFNPKDVAENLKKSGAFIPGIRPGEQ 356
           L     +  PGQPL +L F   I+FF +FYT  + F P +VA NLK    F+PGIRPG++
Sbjct: 306 L---LANFGPGQPLYLLFFVGMIVFFAYFYTFNVSFKPDEVANNLKNQNGFVPGIRPGKK 362

Query: 357 SARYIDGVLTRLTMFGALYMMAVCLLPQFLVVAANVPFYLGGTSLLIVVVVVMDFMSQVQ 416
           +A Y++ V+ R+ + G+ Y+ AVCLLP+ L     +P Y GGTS+LIVV VVMD + Q Q
Sbjct: 363 TAEYLEYVVNRVLVLGSAYLAAVCLLPEILRGQLAIPVYFGGTSVLIVVSVVMDTIQQAQ 422

Query: 417 SHLVSHQYESLMKKANLKG 435
           SHL++HQYE L++K+ L+G
Sbjct: 423 SHLLAHQYEGLIEKSQLRG 441