Pairwise Alignments

Query, 443 a.a., Sec Translocation Complex - SecY subunit from Pseudomonas putida KT2440

Subject, 442 a.a., preprotein translocase subunit SecY from Methanococcus maripaludis S2

 Score = 60.5 bits (145), Expect = 1e-13
 Identities = 90/387 (23%), Positives = 155/387 (40%), Gaps = 53/387 (13%)

Query: 75  SIFALGIMPYISASIIMQLMTAVSPQLEQLKKEGEAGRRKISQYTRYGTVILALVQAIGM 134
           ++  LGI P ++A IIMQL+  V  +L  L       R       +   + L  ++A+ M
Sbjct: 73  TLITLGIGPIVTAGIIMQLL--VGSELISLDLSKPMNRALFQGLQKLFGIALCFLEAL-M 129

Query: 135 SIGLANQGVAFSVGLGFHIVAVSTFVAGAMFMMWLGEQITERGVGNGISMLIFAG----I 190
            +G    G    +      V V     GA+ +++L E ++  G+G+GI + I AG    I
Sbjct: 130 FVGAGAFGALTPL---MTAVLVFQLALGAILIIYLDEIVSRYGIGSGIGLFIAAGVSQTI 186

Query: 191 VAGLPRAIGQ--SFESARTGDINIFALVAIGLLAVAIIGFVVFIERGQRRIAVHYAKRQQ 248
             G   A G    F +A T      AL  I  +   I+ F+V +     R+ +  A    
Sbjct: 187 FVGTFGAEGYLWKFFTAMTAGSLWTALEYILPILGTILVFLVVVYVESIRVEIPLA---H 243

Query: 249 GRKVFAAQTSHLPLKVNMAGVIPAIFASSILLFPASLGAWFGQSEGMG------------ 296
           GR          P+K      +P I A+++    A++  W    E MG            
Sbjct: 244 GR--VKGAVGKYPIKFIYVSNLPVILAAALF---ANIQLWGMFLEKMGFPILGHYTSGRA 298

Query: 297 -------WLQDISQSIAPGQPLNILLFSAGIIFFC-----FFYTALMFNPKDVAENLKKS 344
                  +      S     PL+ + ++  ++ FC     F+      + K +A+ L   
Sbjct: 299 VDGLAYYFSTPYGISSLTADPLHAVFYTVMMVIFCILFGLFWVETSGLDAKSMAKKLGNL 358

Query: 345 GAFIPGIRPGEQS-ARYIDGVLTRLTMFGALYMMAVCLLPQFLVVAANVPFYL-GGTSLL 402
              I G R  ++S  + +   +T +T+ G+ ++        FL  AA+    L GGT +L
Sbjct: 359 DMAIKGFRKSQKSIEQRLKRYITPITVMGSAFV-------GFLAAAADFTGALGGGTGVL 411

Query: 403 IVVVVVMDFMSQVQSHLVSHQYESLMK 429
           + V +V     Q+    +S  + S+ K
Sbjct: 412 LTVSIVYRLYEQLVQEQLSELHPSIAK 438