Pairwise Alignments

Query, 237 a.a., 30S ribosomal subunit protein S3 from Pseudomonas putida KT2440

Subject, 233 a.a., 30S ribosomal protein S3 from Vibrio cholerae E7946 ATCC 55056

 Score =  319 bits (818), Expect = 3e-92
 Identities = 160/228 (70%), Positives = 185/228 (81%), Gaps = 3/228 (1%)

Query: 10  MGQKVHPTGIRLGIVKEHTSVWYADGATYADYLLKDLKTREYLQDKLKSASVSRIDIHRP 69
           MGQKVHP GIRLGIVK   + W+A+   +AD L  D K R+YL  +L +AS+SRI I RP
Sbjct: 1   MGQKVHPNGIRLGIVKPWNATWFANTKDFADNLDGDFKVRQYLSKELANASLSRIVIERP 60

Query: 70  AQTARITIHTARPGIVIGKKGEDVEKLRQDLTKQMGVPVHINIEEIRKPELDAMLVAQSV 129
           A++ R+TIHTARPG+VIGKKGEDVEKLR  + K  GVP  INI E+RKPELD  LVA S+
Sbjct: 61  AKSIRVTIHTARPGVVIGKKGEDVEKLRAAVAKIAGVPAQINIAEVRKPELDGQLVADSI 120

Query: 130 AQQLERRVMFRRAMKRAVQNAMRIGAKGIKIQVSGRLGGAEIARTEWYREGRVPLHTLRA 189
           A QLERRVMFRRAMKRAVQNAMR+GAKGIK++VSGRLGGAEIAR+EWYREGRVPLHTLRA
Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180

Query: 190 DIDYNTYEAHTTYGVIGVKVWIFKGEVIGG---RQEELKPQAPAPRKK 234
           DIDY T  AHTTYGVIGVKVWIFKGE++GG     E  +P+A  P+K+
Sbjct: 181 DIDYATSSAHTTYGVIGVKVWIFKGEILGGMPAATEAAEPKADKPKKQ 228