Pairwise Alignments

Query, 237 a.a., 30S ribosomal subunit protein S3 from Pseudomonas putida KT2440

Subject, 244 a.a., 30S ribosomal protein S3 from Synechococcus elongatus PCC 7942

 Score =  233 bits (593), Expect = 3e-66
 Identities = 111/228 (48%), Positives = 156/228 (68%), Gaps = 3/228 (1%)

Query: 10  MGQKVHPTGIRLGIVKEHTSVWYADGATYADYLLKDLKTREYLQDKLKSASVSRIDIHRP 69
           +GQK++P G RLG+ +EH S W+AD   Y   L +D K R+Y++  L +A ++ I + R 
Sbjct: 1   VGQKINPVGFRLGVTQEHRSRWFADPNRYPQLLQEDKKIRDYVRKNLSNAGIADIRVERK 60

Query: 70  AQTARITIHTARPGIVIGKKGEDVEKLR---QDLTKQMGVPVHINIEEIRKPELDAMLVA 126
           A    + I TARPG+V+G+ G  ++ LR   Q L K     + IN+ E+ + + DA L+ 
Sbjct: 61  ADQVELEIRTARPGVVVGRGGAGIDTLREGLQALLKDSSRQIRINVIEVERVDADAALLG 120

Query: 127 QSVAQQLERRVMFRRAMKRAVQNAMRIGAKGIKIQVSGRLGGAEIARTEWYREGRVPLHT 186
           + +AQQLERRV FRR +++A+Q A R G +GIKIQV+GRL GAEIARTEW REGRVPLHT
Sbjct: 121 EYIAQQLERRVAFRRCVRQAIQRAQRAGVQGIKIQVAGRLNGAEIARTEWTREGRVPLHT 180

Query: 187 LRADIDYNTYEAHTTYGVIGVKVWIFKGEVIGGRQEELKPQAPAPRKK 234
           LRADIDY    A TTYG++G+KVW+F+GE+I G+++        PR++
Sbjct: 181 LRADIDYAYTTATTTYGILGIKVWVFRGEIIPGQEDAAPSNVGQPRRR 228