Pairwise Alignments

Query, 237 a.a., 30S ribosomal subunit protein S3 from Pseudomonas putida KT2440

Subject, 211 a.a., 30S ribosomal protein S3 from Methanococcus maripaludis S2

 Score = 93.6 bits (231), Expect = 3e-24
 Identities = 58/170 (34%), Positives = 92/170 (54%), Gaps = 4/170 (2%)

Query: 50  EYLQDKLKSASVSRIDIHRPAQTARITIHTARPGIVIGKKGEDVEKLRQDLTKQMGVP-V 108
           EY + KL  A  S ID  +     RIT+   +PG VIG+KG+ V++L + L  +  V   
Sbjct: 18  EYFKTKLVRAGYSHIDFKKTPIGTRITVFAEKPGFVIGRKGKMVKELTETLATEYSVKNP 77

Query: 109 HINIEEIRKPELDAMLVAQSVAQQLERRVMFRRAMKRAVQNAMRIGAKGIKIQVSGRLGG 168
            I ++++  P+LD  +V   +A  LER + FR+    A++  M  GAKG+ I VSG+L G
Sbjct: 78  QIEVKQVENPDLDPAVVGHKIASSLERGMHFRKTAHSAIRRVMGSGAKGVAIIVSGKLSG 137

Query: 169 AEIARTEWYREGRVPL--HTLRADIDYNTYEAHTTYGVIGVKVWIFKGEV 216
            E +RTE + +G +        A ++ +   A    G++GV V I + +V
Sbjct: 138 -ERSRTEKFMDGYMKHCGEPAEALVNKSHQLAKLKLGIVGVTVKIMRPDV 186