Pairwise Alignments

Query, 177 a.a., transcription antipausing factor NusG from Pseudomonas putida KT2440

Subject, 205 a.a., transcription antitermination protein NusG from Synechococcus elongatus PCC 7942

 Score =  129 bits (325), Expect = 2e-35
 Identities = 69/184 (37%), Positives = 108/184 (58%), Gaps = 13/184 (7%)

Query: 4   RWYVVHAYSGYEKHVMRSLIERVKLAGMEDGFGEILVPTEEVVEMR-NGQKRKSERKFFP 62
           RWY V   SG EK V  +L +RV+     +   ++ +P   +V+++ +G ++ +E K FP
Sbjct: 22  RWYAVQVASGCEKRVKATLEQRVQTLDAANRILQVEIPETPIVKLKKDGSRQSAEEKVFP 81

Query: 63  GYVLVQMEMNEGTWHLVKDTPRVMGFIGGTAD----------KPAPITDKEAEAILRRVA 112
           GYVLV+M +++  W +V++TP V+ F+G              KP P++  E   I +R  
Sbjct: 82  GYVLVRMILDDDAWQIVRNTPHVINFVGAEQKRPYGRGRGHVKPMPLSPGEVGRIFKRAQ 141

Query: 113 DGSDKPKPKTLFEPGEVVRVIDGPFADFNGSVEEVNYEKSRLQVAVLIFGRSTPVELEFS 172
           +   KP  K     G+ + V+ GPF DF G+V EV+ E+S+L+  + IFGR TPVELEF+
Sbjct: 142 E--QKPTVKIDLAEGDQILVLSGPFKDFEGTVIEVSPERSKLKALLSIFGRDTPVELEFN 199

Query: 173 QVEK 176
           QV+K
Sbjct: 200 QVQK 203