Pairwise Alignments

Query, 177 a.a., transcription antipausing factor NusG from Pseudomonas putida KT2440

Subject, 176 a.a., NusG antitermination factor (NCBI) from Rhodospirillum rubrum S1H

 Score =  218 bits (554), Expect = 6e-62
 Identities = 104/177 (58%), Positives = 137/177 (77%), Gaps = 1/177 (0%)

Query: 1   MAKRWYVVHAYSGYEKHVMRSLIERVKLAGMEDGFGEILVPTEEVVEMRNGQKRKSERKF 60
           M  RWYV+H YSG+E  V +S+ E+    GM+    E+LVPTEE+VE+R G K  +ERKF
Sbjct: 1   MTARWYVIHVYSGFENKVAQSIREQAIQKGMDSRIEEVLVPTEEIVEVRRGAKVNAERKF 60

Query: 61  FPGYVLVQMEMNEGTWHLVKDTPRVMGFIGGTADKPAPITDKEAEAILRRVADGSDKPKP 120
           FPGYVLV+M++++ TWHLVK+T +V GF+GG   +P+PI+D+EAE IL +V +G ++PKP
Sbjct: 61  FPGYVLVKMDLSDETWHLVKNTAKVTGFLGGRG-RPSPISDREAERILHQVQEGIERPKP 119

Query: 121 KTLFEPGEVVRVIDGPFADFNGSVEEVNYEKSRLQVAVLIFGRSTPVELEFSQVEKV 177
              F+ GE VRV DGPF  FNG VE+V+ EK+RL+V+V IFGRSTPVELE+SQVEKV
Sbjct: 120 SITFDVGEQVRVCDGPFTSFNGMVEDVDEEKARLKVSVSIFGRSTPVELEYSQVEKV 176