Pairwise Alignments

Query, 177 a.a., transcription antipausing factor NusG from Pseudomonas putida KT2440

Subject, 180 a.a., transcription termination/antitermination protein NusG from Parabacteroides merdae CL09T00C40

 Score =  126 bits (316), Expect = 2e-34
 Identities = 69/175 (39%), Positives = 103/175 (58%), Gaps = 2/175 (1%)

Query: 3   KRWYVVHAYSGYEKHVMRSLIERVKLAGMEDGFGEILVPTEEVVEMRNGQKRKSERKFFP 62
           K++YV+ A SG E  V   L   +K   + +   ++L+PTE+   +RNG+K   ER + P
Sbjct: 6   KKFYVLRAISGKENKVREYLEAELKNTDLGEYVSQVLIPTEKTFTVRNGKKVMKERAYLP 65

Query: 63  GYVLVQMEMNEGTWHLVKDTPRVMGFIGGTADKPAPITDKEAEAILRRVADGSDKPKPKT 122
           GYVLV+  +     H +++ P V+GF+GG +D P P+   E   IL  V +  ++     
Sbjct: 66  GYVLVEAALVGEVAHRLRNIPNVIGFLGG-SDNPVPLRPAEVSRILGTVDELQEQQDDLD 124

Query: 123 L-FEPGEVVRVIDGPFADFNGSVEEVNYEKSRLQVAVLIFGRSTPVELEFSQVEK 176
           + F  GE V++  GPF  F G +EEVN EK +L+V V +FGR TP+EL + QVEK
Sbjct: 125 IQFYVGENVKITFGPFNGFTGVIEEVNAEKKKLKVMVKVFGRKTPLELGYMQVEK 179